Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq115 154 1e-32 seq3011 141 7e-29 seq1711 113 3e-20 seq1921 91.5 1e-13 >seq115 Length=2791810 Score = 154 bits (170), Expect = 1e-32 Identities = 180/243 (74%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 69075 GTGAACGGATGGGGAAAGTTTTATATCCCCACCGCCGTGACGATGCAGGTCATCGGTTAT 69134 |||||||| |||||||| || || |||||| ||| | ||||||||||||||| Sbjct 107604 GTGAACGGCTGGGGAAAATTCTACCTCCCCAAAATCGTAAACATGCAGGTCATCGGTGTG 107663 Query 69135 GTGACGGGAACTCCATACCAATGTGACCAGCTTGTCCTGATGACCTGCGAGGACCAGAAG 69194 ||| ||| || | | | ||||||| |||| || ||||||||||| |||||| | ||| Sbjct 107664 GTGGAGGGCACCTCGTGTCCATGTGACGAGCTCGTGCTGATGACCTGTGAGGACAAAAAG 107723 Query 69195 GTGTACGGCTATGACGGAGACGAGCTGCATGTGGTGGCTAACTGTCTGGATCAGATGGGG 69254 |||||| ||| || ||||| ||||||||| |||||||| | || | | || | Sbjct 107724 CTGTACGCCTACGATGGAGAGGAGCTGCATCTGGTGGCTTCCAGTTTCCAGCAACTACAT 107783 Query 69255 GAAGAAGGAATAGCCTATCCTGCATTCCAGAGCTATTATCATGGGGAGGCCTTCAAACAT 69314 || ||| |||| ||||| |||| | ||||||| || |||| |||||||||||| || Sbjct 107784 GACAAAGACATAGAGTATCCAGCATCCAAGAGCTACTACAATGGAGAGGCCTTCAAAGAT 107843 Query 69315 ATG 69317 ||| Sbjct 107844 ATG 107846 >seq3011 Length=8691009 Score = 141 bits (156), Expect = 7e-29 Identities = 137/175 (78%), Gaps = 1/175 (1%) Strand=Plus/Minus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 |||||| ||||||||||| || || |||||||| ||||| || ||||| || || ||||| Sbjct 8387131 CATGTCTGTGTACTCTGCACCAAAGTGCCTCCACTGGAAACCATACACAGGACCTAGGTC 8387072 Query 27549 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 27608 |||||||| |||| ||| || ||||||| |||||| | || |||||||| || Sbjct 8387071 ACCCTCTTCTCTGTCAGTGAACCCAAGGTTGTCCAGAAAGTCCCGAGACCCGTTGGCATC 8387012 Query 27609 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGA-CCCTCTGAC 27662 ||||||||| || || || || || ||||| ||||| ||||| || |||| |||| Sbjct 8387011 CCAGATCTTCACTCCTTTTTCTGACAGCTCCTTGGAATTTGTTGATCCCTGTGAC 8386957 Score = 114 bits (126), Expect = 1e-20 Identities = 122/161 (76%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267 || || || | ||| || |||||||| || || || || |||||||||||||| || || Sbjct 8387944 AGTCCTGTAATGTGTGCAATCATGTAGGTAAGAAGTGAATAGCTGGCGATGTTGAAAGGC 8387885 Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327 || || | ||||| || | || | |||||| ||||||||||| ||||| || |||| Sbjct 8387884 ACTCCTAATCCCATATCAGCTGAGCGCTGGTACAGCTGACACGACAGCTCGCCGTCGCAC 8387825 Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCAT 27368 ||||| ||||| || | |||||||| || || || ||||| Sbjct 8387824 ACGTAGAACTGGCAGAGTGCGTGGCAGGGGGGCAGCGCCAT 8387784 >seq1711 Length=993974 Score = 113 bits (124), Expect = 3e-20 Identities = 196/280 (70%), Gaps = 4/280 (1%) Strand=Plus/Minus Query 69040 TTGAGGACACAGAGTATAAAGACAGGCCTGCAGTGGTGAACGGATGGGGAAAGTTTTATA 69099 |||||||||| | || ||||| | | ||||||||||| ||||| || || || Sbjct 2711 TTGAGGACACCGTTTACAAAGATAATTTTCTTGTGGTGAACGGTTGGGGGAAATTCTACC 2652 Query 69100 TCCCCACCGCCGTGACGATGCAGGTCATCGGTTATGT-GACGGGAACTCCATACCAATGT 69158 | || | | || || |||||||| || ||| || || || | ||| | ||| ||| Sbjct 2651 TTCCGAAGGTTGTAACCATGCAGGTTATTGGTGTGGTCGAAGGCATCTCGTTCCCA-TGT 2593 Query 69159 GACCAGCTTGTCCTGATGACCTGCGAGGACCAGAAGGTGTACGGCTATGACGGAGACGAG 69218 || ||||| || ||||||||||| |||||||| |||| || | |||||| | ||| ||| Sbjct 2592 GAGCAGCTCGTTCTGATGACCTGTGAGGACCAACAGGTATATGCCTATGATGAAGAGGAG 2533 Query 69219 CTGCATGTGGTGGCTAACTGTCTGGATCAGATGGGGGAAGAAGGAATAGCCTATCCTGCA 69278 |||||| |||||||| | || | ||| | | || || ||||| | ||||| | Sbjct 2532 CTGCATCTGGTGGCTTCAAGCATGAAGCAGTTACGTGACGAGGGAATGGAGTATCCAGGC 2473 Query 69279 TTCCAGAGCTATTATCATGGG-GAGGCCTTCAAACATATG 69317 | | | ||||| || ||| |||||||| ||| | ||| Sbjct 2472 TCCACGGTTTATTA-CAGGGGAGAGGCCTTTAAAGACATG 2434 >seq1921 Length=773712 Score = 91.5 bits (100), Expect = 1e-13 Identities = 118/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 69155 ATGTGACCAGCTTGTCCTGATGACCTGCGAGGACCAGAAGGTGTACGGCTATGACGGAGA 69214 |||||||||||| | |||||||||| |||||||| ||||||||| |||||| | ||| Sbjct 590750 ATGTGACCAGCTCATTCTGATGACCTTTGAGGACCAACAGGTGTACGCCTATGATGAAGA 590809 Query 69215 CGAGCTGCATGTGGTGGCTAACTGTCTGGATCAGATGGGGGAAGAAGGAATAGCCTATCC 69274 ||||| ||| |||||||| | | | ||| | || || ||||| | ||||| Sbjct 590810 GGAGCTTCATCTGGTGGCTTCAAGCTTCAAGCAGCTATTCGATGAGGGAATGGAGTATCC 590869 Query 69275 TGCATTCCAGAGCTATTATCATGGGGAGGCCTTCAAACATATG 69317 |||| | | | ||| || | ||||||| || ||| ||||| Sbjct 590870 AGCATCCAAAACCTACTACAAGGGGGAGGGTTTTAAAAATATG 590912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369491190523205