Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06]
3,555 sequences; 859,842,118 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq3478 410 2e-109
seq1157 86.0 9e-12
>seq3478
Length=3494213
Score = 410 bits (454), Expect = 2e-109
Identities = 1271/1950 (65%), Gaps = 35/1950 (2%)
Strand=Plus/Minus
Query 75656 TTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTA 75715
||||| ||||| |||||||||| ||||| || | || | || || || || ||
Sbjct 2084512 TTCTTCATCTCCTCATTCCACAGGCCCCTCTCTGTCAGGTCTTTGAGCAGGTGGGGGTTG 2084453
Query 75716 ACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCC 75775
|| || ||||| || || || | || | || ||||| || || || || || | ||
Sbjct 2084452 ACGATCTGAAACTCCCCCGAGAGCACCCGGCGGGTGTAGATGTTGCTTGTGTAGGCCTCG 2084393
Query 75776 ACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAAT 75835
| || || ||||| |||| || || || || || || || ||||| || | || ||
Sbjct 2084392 ATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATTGGGGACAGCAGC 2084333
Query 75836 AAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGA 75895
| || || || | |||||| | ||| || || || || ||||| ||||| ||
Sbjct 2084332 AGGCTGTTCCTCACGCCATGTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCACAGG 2084273
Query 75896 TCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCA 75955
|| | ||| ||||| | ||||| || ||||| || || || | || ||
Sbjct 2084272 TCCGTTGGCGTCTTCTCCCACATGTCGTACTGGAGAATGCCCTTACTCACCGGCGAGCCT 2084213
Query 75956 TTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCG 76015
| || || || || || ||| || | || || ||||| ||||| || || || |
Sbjct 2084212 TCGTACGTCTCATAGGTGCCGAGCTCGGCGGCCAGCTCGCAGCTCGCTTCCAAAGCGGCA 2084153
Query 76016 TAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGA 76075
||||| || || || || |||| | || || ||| || || | || ||||| |||
Sbjct 2084152 TAATACATAGTCTCAAAGATCTGGATGTTGAGCAGTTGAGCCTCGGGGCTTTCAAAGGGA 2084093
Query 76076 TAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGT 76135
||| | | ||| || || ||||| || | |||||| || || || || || || || ||
Sbjct 2084092 TAACGCATAAGGATGAAAGCATCAGCCAATCCCTGGACCCCGATTCCTATCGGCCTGTGG 2084033
Query 76136 CTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTG 76195
| | | || || | |||||| | ||||| || || || || |||| || ||
Sbjct 2084032 CGCATGTTCGACCTCCTGGCTTCTTCCACCGGGTAGTAGTTGATGTCGATAACCTTGTTC 2083973
Query 76196 AGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCT 76255
| || ||||||| |||||| |||| | ||| ||| ||| | | | ||
Sbjct 2083972 AAGTTCCTGACAATTACTTTGGTCACGGATGCCAATTTTTTAAAGTCATAAGTCCGCTCA 2083913
Query 76256 A---TCACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCA 76312
| || |||| || ||||| | ||| || ||||| ||||| || ||||| | |
Sbjct 2083912 GGGGTGACGTACATGTTGAGAGCGACAGAGGCCAGATTGCAAACCGCCACCTCGT---CC 2083856
Query 76313 TTGGCATATTGTATT-----ATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGAT 76367
||| || |||| | || |||||||| || || || |||||||| || || ||||
Sbjct 2083855 TTGC--TAGTGTACTCGACGATTTCCGTGCAGAGGTTGCTGCACTTGATGGTGCCCAGAT 2083798
Query 76368 TTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTT 76427
| || ||||||||||| |||| || | || || || | | |||| || || ||||
Sbjct 2083797 TCTGCTGGTTGCTCTTCCTGTTGCAGGCATCTTTGTAGACCATGTACGGCGTCCCGGTTT 2083738
Query 76428 CAATCTGTGATTCGATAATAGATTTCCAGACGACTCT-AGCTTTTATTATAGATTTGTAT 76486
| |||| || ||||| || | | ||| | | || ||| || | | | ||
Sbjct 2083737 CTGTCTGCGACTCGATGATTGCATACCATA-GCTGCTGAGCCTTCACCACACGCTTCACC 2083679
Query 76487 CGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCC 76546
| | ||| | |||||| || || | |||||| || || ||||| ||||||
Sbjct 2083678 CTCCCCTCCTTCTCATATCTGGTGTAGAGTTCTTCAAACTCCTCCCCCCAGCACTCATCC 2083619
Query 76547 AAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTC 76606
| || || || || ||||||||||| ||||| || | | | || ||||| |||
Sbjct 2083618 AGCCCGGGGCAGTCGGCCGGACACATCAGGGACCAGTCTTCGTTGTTCTCCACCCGCTTC 2083559
Query 76607 ATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTT 76666
|| ||||| ||||| ||||| || || || || || | || || | || || |||
Sbjct 2083558 ATGAAGAGGTCAGGGATCCACAGGGCGTAGAACAGGTCCCTGGCTCGCTGCTCCTCCTTT 2083499
Query 76667 CCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 76726
|| || ||||| || || || ||||| || | | ||| | ||||| || || || ||
Sbjct 2083498 CCCGTGTTCTTCTTCAGCTCCAGGAAGTCAAACACATCGAAGTGCCAGGGCTCCAGGTAC 2083439
Query 76727 ATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTA 76786
|| || | | || |||| ||| || || |||||||| | ||| | || ||||| ||
Sbjct 2083438 ATGGCGAAGGCGCCGGGTCTTTTGTTGCCCCCCTGATCAACATAACGCGCTGTGTTGTTG 2083379
Query 76787 TAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTT 76846
||||| ||||||||||| | | ||||| || || || || || | || || | |
Sbjct 2083378 TAAACCCTCAACATTGGGACGAGCCCGTTGGAACAGCCGTTGGTGCCGGCGATGTAGC-T 2083320
Query 76847 CCACATGCA-CGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAG 76905
|| | || | | ||| || | | | ||| || ||||| || ||| ||||| ||
Sbjct 2083319 CCCCGTGGATCTAATGCAGCTGACTGCCACGCCAATCCCTCCAGCTGATTTGGAGATGAG 2083260
Query 76906 AGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAG 76965
|| || | || | ||||| ||||| ||||| || || |||||| ||||| || ||
Sbjct 2083259 GGCGCAATGCTTTAGCGTGTCGTAGATCCCCTCGATGCTGTCATCCTTCATGGCGAGCAG 2083200
Query 76966 AAAACAGCTAGACATTTG----ATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATG 77021
|| ||||| |||| || || || ||||| ||||| || | || || || |
Sbjct 2083199 GAAGCAGCTGGACAGCTGCGGCCTGTTG----GTTCCAGCATTGAAGAGGGTCGGGGAGG 2083144
Query 77022 CATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCC 77081
| || |||||||| || || || || || ||||| || || || |||||||| ||||||
Sbjct 2083143 CGTGGGTGAACCACTTCTCTGACAGCAGGTTGTAGGTCTCGATGACTGCTTCGATATCCG 2083084
Query 77082 ATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTAT 77141
|| ||||| ||||| || | ||| | ||| ||||| || || || | ||
Sbjct 2083083 TCCCGTGGATTCCCACAGCCACCCTCATGAGCATGTGCTGCGGACGCTCAGCTACTTTGC 2083024
Query 77142 TATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAA 77201
||| || || | || ||| || |||| ||| || || ||||| ||||||| || |
Sbjct 2083023 CATTGATCTTTAGCAGGTAGGAGCGCTCCAGAGTCTTGAAGCCAAAGAAGTTGTAGGAGA 2082964
Query 77202 AGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACAATATCCA 77261
| ||||| || || || || |||| || || ||| || | | |||||| | ||
Sbjct 2082963 AATCTCTGTCATAGATTATGGCCGAGTTAAGGCGGTCTTTGTTTGCAAGAACAATGT-CA 2082905
Query 77262 TGACAGT-GGTAGAAATAATTGGAGA-TCGTATTCCATTTTTA--GGATTAACATAGTTA 77317
| || | ||||| || | || | | || | || | || || | |||||
Sbjct 2082904 AGTGTGTCTTTCGAAATCATGGAGGAGTGGCGTT---TGTTCAGGGGGTTGATGTAGTTG 2082848
Query 77318 AATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACG 77377
| | ||| ||||| |||||||| || | || || || || ||||| | || || |||
Sbjct 2082847 TACAGGTCCTCCATGACGTCGCTGAACACCTTCTTCGTCTCTTTGTGCAAGTTAGAGACG 2082788
Query 77378 GCTATTCTAGCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATT 77437
|| || | || || || || || ||||| || | | || ||| ||||| || ||
Sbjct 2082787 GCGATGCGTGCTGCGAGGATGGCGTAGTCGGGGTACTTGGTTGTGAGAGTGGCAGCGATC 2082728
Query 77438 TCTGCCGCTAAAGTATCTAATTCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACT 77497
|| ||||| | || || | || | ||| || || ||| | || | || || || ||
Sbjct 2082727 TCCGCCGCCAGCGTGTCGAGCTCCACAGTGGTGACGCCGCTGTACAAACCCTGGATGACC 2082668
Query 77498 TTCATGGCTATTTTGATAGGATCTACAAACTCGGTGTTCAAACCATAACATAATTTTCT- 77556
||||| | || | | || || |||||||| |||| | || || || || ||||
Sbjct 2082667 TTCATCGTGATCTGGGCTGGGTCCACAAACTCCATGTTGAGTCCGTAGCA-AAGCTTCTG 2082609
Query 77557 AATACGAGATGTGATTTTATCAAACATGAC 77586
|| |||||||||||||| || ||||||||
Sbjct 2082608 GATGCGAGATGTGATTTTGTCGAACATGAC 2082579
>seq1157
Length=2784775
Score = 86.0 bits (94), Expect = 9e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053
|| || || || |||| ||||||||| || ||||||||||| || || || || | |||
Sbjct 2748469 GTGCCAGCGTTGAACAGTGTAGGAGAAGCGTGAGTGAACCACTTCTCTGACAGCAAGTTG 2748410
Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113
|| || ||||| |||| || || || | || |||||| || || | || | ||| | |
Sbjct 2748409 TAGGTCTCAATGGCTGCATCAATGTCACCTTTATGAATCCCGACTGACACTCTCATTAGC 2748350
Query 77114 ATATGCTGAGGTCGTTC 77130
|| ||||| ||||| ||
Sbjct 2748349 ATGTGCTGGGGTCGCTC 2748333
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712902718977600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |