Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq3522 131 1e-25 >seq3522 Length=4083170 Score = 131 bits (144), Expect = 1e-25 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || || || | || || ||||| || ||| |||||| ||||||||||| || Sbjct 3190767 CATGCCACCCCTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 3190708 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| ||| | || || |||||||| ||||||||||||| | |||||| || | Sbjct 3190707 AGAGAGGGTGCGGCCATCTTCTAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGG 3190648 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | |||||||| ||| || || ||||| || | || ||||| | || Sbjct 3190647 GGGAATGCCTTCCTTGTCCTGGATTTTGGCCTTCACGTTTTCAATTGTGTCACTTGGCTC 3190588 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||||| || || ||||| || |||||||||||||||||||| |||||| Sbjct 3190587 AACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATG 3190536 Score = 131 bits (144), Expect = 1e-25 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || || || | || || ||||| || ||| |||||| ||||||||||| || Sbjct 3191451 CATGCCACCCCTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 3191392 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| ||| | || || |||||||| ||||||||||||| | |||||| || | Sbjct 3191391 AGAGAGGGTGCGGCCATCTTCTAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGG 3191332 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | |||||||| ||| || || ||||| || | || ||||| | || Sbjct 3191331 GGGAATGCCTTCCTTGTCCTGGATTTTGGCCTTCACGTTTTCAATTGTGTCACTTGGCTC 3191272 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||||| || || ||||| || |||||||||||||||||||| |||||| Sbjct 3191271 AACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATG 3191220 Score = 131 bits (144), Expect = 1e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || || || | || || ||||| || ||| |||||| ||||||||||| || | | Sbjct 3191675 CCACCCCTGAGACGCAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 3191616 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| | || ||||||||||| || |||||||||| | |||||| || | || Sbjct 3191615 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGA 3191556 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCAC 44289 | || ||||| ||| ||||| ||| | |||| | |||||||| || || || Sbjct 3191555 ATGCCCTCCTTATCCTGGATCTTGGCCTTGAC-GTTCTCAATGGTGTCACTGGGCTCAAC 3191497 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||| || || ||||| || |||||||||||||||||||| |||||| Sbjct 3191496 CTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATG 3191448 Score = 129 bits (142), Expect = 4e-25 Identities = 170/233 (73%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || || || | || || ||||| || ||| |||||| ||||||||||| || Sbjct 3190995 CATGCCACCCCTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 3190936 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| ||| | || ||||||||||| || |||||||||| | |||||| || | Sbjct 3190935 AGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGG 3190876 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | || ||||| ||| || || ||| | |||| | |||||||| || | Sbjct 3190875 GGGAATGCCCTCCTTATCCTGGATTTTGGCCTTGAC-GTTCTCAATGGTGTCACTGGGCT 3190817 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | ||||||| || || ||||| || |||||||||||||||||||| |||||| Sbjct 3190816 CAACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATG 3190764 Score = 129 bits (142), Expect = 4e-25 Identities = 170/233 (73%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || || || | || || ||||| || ||| |||||| ||||||||||| || Sbjct 3191223 CATGCCACCCCTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 3191164 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| ||| | || ||||||||||| || |||||||||| | |||||| || | Sbjct 3191163 AGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGG 3191104 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | || ||||| ||| || || ||| | |||| | |||||||| || | Sbjct 3191103 GGGAATGCCCTCCTTATCCTGGATTTTGGCCTTGAC-GTTCTCAATGGTGTCACTGGGCT 3191045 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | ||||||| || || ||||| || |||||||||||||||||||| |||||| Sbjct 3191044 CAACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATG 3190992 Score = 125 bits (138), Expect = 5e-24 Identities = 169/233 (73%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || || || | || || ||||| || ||| |||||| ||||||||||| || Sbjct 3190539 CATGCCACCCCTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 3190480 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| ||| | || ||||||||||| || |||||||||| | |||||| || | Sbjct 3190479 AGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGG 3190420 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | |||||||| ||| || || |||| | |||| | ||||||||| || | Sbjct 3190419 GGGAATGCCTTCCTTGTCCTGGATTTTGGCCTTC-ACGTTCTCGATGGTGTCGCTGGGCT 3190361 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | ||||| | || || ||||| || ||||| || ||||| ||||| |||||| Sbjct 3190360 CAACCTCAAGGGTGATGGTCTTGCCAGTGAGCGTTTTCACAAAGATCTGCATG 3190308 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || || || | || || ||||| || ||| |||||| ||||||||||| || | | Sbjct 3219857 CCACCCCTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 3219798 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| | || ||||||||||| || |||||||||| | |||||| || | || Sbjct 3219797 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGA 3219738 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | || ||||| ||| || || ||| | | | |||||||| || || ||| Sbjct 3219737 ATGCCCTCCTTATCCTGGATTTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACC 3219678 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || | || || ||||| || || ||||| ||||| ||||| |||||| Sbjct 3219677 TCGAGAGTGATGGTCTTACCAGTTAGGGTTTTCACAAAGATCTGCATG 3219630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359974802853435