Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= NC_033176.1 Length=224064 Score E Sequences producing significant alignments: (Bits) Value seq3144 159 5e-34 seq3111 113 6e-20 seq2933 105 1e-17 >seq3144 Length=4646089 Score = 159 bits (176), Expect = 5e-34 Identities = 162/211 (77%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 8375 CCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTCGCCATGAGGCCT 8434 || |||||||||||||||||||||||| |||||||||||||| || |||| ||||| Sbjct 4037834 CCTCCGAAGGTGCTGGGCTTCCAGTACTCCGGGGAGCAGATGGGATTTCCCATTAGGCCC 4037775 Query 8435 TTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGG 8494 ||||||||||| |||||||||| ||| | || | || || |||||| |||| | | | Sbjct 4037774 TTGAGGGAGAAAGGAGCCCCCATCTCCACCATTGTTTCCCCAAAGATGCCGTTATGTCTG 4037715 Query 8495 GGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCTCCGTAAAGGGCC 8554 ||||| ||||||| | || | ||| ||||||||||| ||||||| ||||| || || Sbjct 4037714 GGCTTCTCCACCAGCAGGCCCGGGTAGAGCTCCACAGCATCGACGTGCCCGTACAGCTCC 4037655 Query 8555 CTGAGTTCGGCAGCGATCTCCTTTTCTCCTG 8585 || | ||||| || || || || |||| Sbjct 4037654 TCCAGCACCGCAGCCATTTCTTTCTCCCCTG 4037624 Score = 150 bits (166), Expect = 3e-31 Identities = 128/158 (81%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 9235 CCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCT 9294 ||||| | |||||| || | ||||||||| ||| |||||| ||| | ||| || | Sbjct 4036167 CCGATTAGGATGAGCCGTGCGGTCTGGAAGAGTCTTTCGTCATCCCAGTATGGGTGGACC 4036108 Query 9295 TGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATG 9354 | |||||| ||||||||||| | ||||||||| | ||||||||| |||||||||||||| Sbjct 4036107 TCTTTCAGCACATCGCACACACGGTTGTGTTCGCGGAGCCAGATGGTGGCGTACATCATC 4036048 Query 9355 AGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGC 9392 || ||||| ||||||||||| ||||| || |||||||| Sbjct 4036047 AGACCAGGGACCAGGCCAAATGCCTCGTGGCCGACAGC 4036010 Score = 91.5 bits (100), Expect = 2e-13 Identities = 202/298 (68%), Gaps = 14/298 (5%) Strand=Plus/Minus Query 8946 TACTCGGCCGGCTATTTGTTTCGTGAACGATTCTACTAGCTGGGTAATGCCGTGA---GT 9002 ||| || ||||| || || || |||||||| || || || | | | |||||||| || Sbjct 4036797 TACCCGTCCGGCAATCTGATTGGTGAACGACTCCACCAGGTTGCTGATGCCGTGCTCGGT 4036738 Query 9003 CATGAGTATGGAATTGTTGTAGACGAAGTTAACGTAGTCATACTTTGTTTTATCAATCTC 9062 || || || ||||| |||| || | |||| ||| | ||| | ||||| | Sbjct 4036737 CACGACAGAGG---TGTTGAAGACAAACTGCTTGTAGCTATAATCTGTCTCCTCAATGTG 4036681 Query 9063 AAATGCATCCGGCATGAGAGAATGCCAGTGATACAACATGTTAAACTCGGAAAATATACG 9122 || ||| ||||| |||| |||||||| || | |||| ||||| || || || Sbjct 4036680 GAAACTATCGGGCATCAGAGGGTGCCAGTGGTAAAGGGTGTTGAACTCAGATGCAATGCG 4036621 Query 9123 ATTTTGGTACTGGAA-CGAAGTACCAAAGAGCAGTTCGGGCTTAAACAGCAGCTGAAAAT 9181 || ||||||||||| || | ||||||||| ||||| | |||| || | || | Sbjct 4036620 GTTCTGGTACTGGAAGCGCTG-GTTAAAGAGCAGCTCGGGGTCAAACTTGAGTTTGAAGT 4036562 Query 9182 GGTAGCCGCTGAGCTGCTGAACGTATTGC---GTCACGATAATGTTGATGGTTTCCCC 9236 | |||||||| || ||||| ||||| | | ||||| || |||||||| || || Sbjct 4036561 GATAGCCGCTCAGATGCTGCACGTAGTCCTCAATCACG---ATTTTGATGGTCTCACC 4036507 >seq3111 Length=5441797 Score = 113 bits (124), Expect = 6e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 9232 TCCCCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGT 9291 || || ||||||||||||| | |||||||| || ||||| ||| ||| |||||| Sbjct 3344362 TCACCAATAATGATGAGTCTGGCTGTCTGGAAAAGCTGCTCATCATCCCAGGTGGGATGT 3344303 Query 9292 TCTTGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATC 9351 ||| || || | || || || ||||| ||||||| ||||| || ||||| ||||| Sbjct 3344302 TCTGCCTTTAGGATGTCACAGACTCTGTTATGTTCCCGCAGCCATATGGTGGCATACATG 3344243 Query 9352 ATGAGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGC 9411 | || || || | | |||||| |||| ||||||| ||||||||| ||| | | || Sbjct 3344242 GTTAGACCCGGCAGAATGCCAAATACCTCCTGACCGATGGCCAGACGCTTGTCTGCTGGG 3344183 Query 9412 ACTTCGGGAGGATAGATCATGTGCACCTGGACGTC 9446 | | |||||| | ||||||||| |||| || Sbjct 3344182 ATGTTTTCAGGATACACCATGTGCACTGGGACCTC 3344148 Score = 100 bits (110), Expect = 4e-16 Identities = 171/248 (69%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 8303 GGACACCCCTTGACGTTGCTACAGACTAGAGACTGAATAGTTGCGCTCTTGACGATCCCG 8362 ||||||| ||| |||| ||| || || | | ||| || |||||||||| Sbjct 3349156 GGACACCATTTGCTGTTGAGACACACCAGTTTTTTCAGAGTGGCCGTCTTGACGATATTA 3349097 Query 8363 AACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTC 8422 || || ||||| || |||||||||||||||||||| | || |||||||| ||| Sbjct 3349096 AAGCCGGTTTCTCCTCCAAAGGTGCTGGGCTTCCAGTATTCAGGCGAGCAGATTGGGTTT 3349037 Query 8423 GCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATG 8482 | | |||||||| || || || ||||| |||| ||| | |||||||| || || ||| Sbjct 3349036 CCAAGCAGGCCTTTCAGTGAAAAGGGAGCACCCATCTCCACCATGCTCTCTCCAAAAATG 3348977 Query 8483 GCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCT 8542 || || |||||| || || | || | || | ||| | ||||| || || | ||| Sbjct 3348976 GCATTAGGACGGATTTTCTCTAGCATTATGCCTGGGTAAAACTCCAGGGCGTCTATGTCA 3348917 Query 8543 CCGTAAAG 8550 || || || Sbjct 3348916 CCATAGAG 3348909 >seq2933 Length=7034445 Score = 105 bits (116), Expect = 1e-17 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 8363 AACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTC 8422 || ||||| | ||| || |||||||||||||||||||| |||| ||||| || ||| Sbjct 2763493 AAGCCCACCTTTCCTCCAAAGGTGCTGGGCTTCCAGTATTCCGGAGAGCATATAGGGTTT 2763434 Query 8423 GCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATG 8482 ||| ||||||||| |||||||| || || |||| ||| | ||||| || || || ||| Sbjct 2763433 CCCAGGAGGCCTTTAAGGGAGAAGGGGGCACCCATCTCCACCATGCTTTCTCCAAATATG 2763374 Query 8483 GCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCT 8542 || | || | || |||| ||| || |||| ||| | |||| || || | ||| Sbjct 2763373 GCCCCCGCTCGTGTTTTCTCCAACAACAAGCCGGGGTAAAATTCCAGTGCGTCAATGTCA 2763314 Query 8543 CCGTAAAG 8550 |||| || Sbjct 2763313 TCGTAGAG 2763306 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 9232 TCCCCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGT 9291 || |||||||| ||||| || ||||||||||| || ||||| || ||| ||||| Sbjct 2761293 TCACCGATAATAATGAGCCGTGTGGTCTGGAAAAGCTGCTCATCGTCCCAGGTGGGATGC 2761234 Query 9292 TCTTGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATC 9351 || ||||| | ||| || || | |||||| ||||| ||||| | ||||||||||| Sbjct 2761233 TCCGCTTTCAATATATCACAGACTCGGTTGTGCTCCCTCAGCCACAGCGTGGCGTACATT 2761174 Query 9352 ATGAGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGC 9411 | ||||| | || ||| | | || ||||||| ||||| | | |||| Sbjct 2761173 CCCAAACCAGGGAGAAGTCCATAGACTTCCTGACCGATAGCCATCTGAGCCTCAGCGGGG 2761114 Query 9412 ACTTCGGGAGGATAGATCAT 9431 ||| ||||||| ||| |||| Sbjct 2761113 ACTCCGGGAGGGTAGCTCAT 2761094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716844943787200