Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06]
3,555 sequences; 859,842,118 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq3522 141 9e-29
>seq3522
Length=4083170
Score = 141 bits (156), Expect = 9e-29
Identities = 165/220 (75%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704
||||| | || || || || ||| ||||||||| ||||| ||||| |||||||||||
Sbjct 3190754 AGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGG 3190695
Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764
| || || |||||||||||||| || ||||| | ||| ||||| | ||||| || |||
Sbjct 3190694 CCATCTTCTAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCC 3190635
Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGT 41823
|||||| |||||| |||| ||| | | ||||| || | ||| ||||||| ||
Sbjct 3190634 TTGTCCTGGATTTTGGCCTTC-ACGTTTTCAATTGTGTCACTTGGCTCAACCTCCAGGGT 3190576
Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|| || || || || || ||||| ||||| |||||||||
Sbjct 3190575 GATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATG 3190536
Score = 141 bits (156), Expect = 9e-29
Identities = 165/220 (75%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704
||||| | || || || || ||| ||||||||| ||||| ||||| |||||||||||
Sbjct 3191438 AGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGG 3191379
Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764
| || || |||||||||||||| || ||||| | ||| ||||| | ||||| || |||
Sbjct 3191378 CCATCTTCTAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCC 3191319
Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGT 41823
|||||| |||||| |||| ||| | | ||||| || | ||| ||||||| ||
Sbjct 3191318 TTGTCCTGGATTTTGGCCTTC-ACGTTTTCAATTGTGTCACTTGGCTCAACCTCCAGGGT 3191260
Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|| || || || || || ||||| ||||| |||||||||
Sbjct 3191259 GATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATG 3191220
Score = 138 bits (152), Expect = 1e-27
Identities = 163/221 (74%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704
||||| | || || || || ||| ||||||||| ||||| ||||| |||||||||||
Sbjct 3190526 AGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGG 3190467
Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764
| || || ||||||||||| || || ||||| | ||| ||||| | ||||| || |||
Sbjct 3190466 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCC 3190407
Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824
|||||| |||||| ||||| | | |||||||| | ||| ||||| | ||
Sbjct 3190406 TTGTCCTGGATTTTGGCCTTCACGTTCTCGATGGTGTCGCTGGGCTCAACCTCAAGGGTG 3190347
Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
|| || || || || ||||| || || || |||||||||||
Sbjct 3190346 ATGGTCTTGCCAGTGAGCGTTTTCACAAAGATCTGCATGTT 3190306
Score = 134 bits (148), Expect = 1e-26
Identities = 165/223 (74%), Gaps = 8/223 (4%)
Strand=Plus/Minus
Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704
||||| | || || || || ||| ||||||||| ||||| ||||| |||||||||||
Sbjct 3190982 AGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGG 3190923
Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764
| || || ||||||||||| || || ||||| | ||| ||||| | ||||| || ||||
Sbjct 3190922 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCC 3190863
Query 41765 TTGTCCATGATTTTTTGCTTCAACGACG-ACACA---GTGTCGCTCGACTCCACCTCCAC 41820
|| ||| |||||| ||| |||| | || ||||| || | ||| |||||||
Sbjct 3190862 TTATCCTGGATTTTGGCCTT----GACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAG 3190807
Query 41821 CGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|| || || || || || || ||||| ||||| |||||||||
Sbjct 3190806 GGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATG 3190764
Score = 134 bits (148), Expect = 1e-26
Identities = 165/223 (74%), Gaps = 8/223 (4%)
Strand=Plus/Minus
Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704
||||| | || || || || ||| ||||||||| ||||| ||||| |||||||||||
Sbjct 3191210 AGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGG 3191151
Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764
| || || ||||||||||| || || ||||| | ||| ||||| | ||||| || ||||
Sbjct 3191150 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCC 3191091
Query 41765 TTGTCCATGATTTTTTGCTTCAACGACG-ACACA---GTGTCGCTCGACTCCACCTCCAC 41820
|| ||| |||||| ||| |||| | || ||||| || | ||| |||||||
Sbjct 3191090 TTATCCTGGATTTTGGCCTT----GACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAG 3191035
Query 41821 CGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|| || || || || || || ||||| ||||| |||||||||
Sbjct 3191034 GGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATG 3190992
Score = 131 bits (144), Expect = 2e-25
Identities = 164/223 (74%), Gaps = 8/223 (4%)
Strand=Plus/Minus
Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704
||||| | || || || || ||| ||||||||| ||||| ||||| |||||||||||
Sbjct 3191666 AGACGCAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGG 3191607
Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764
| || || ||||||||||| || || ||||| | ||| ||||| | ||||| || ||||
Sbjct 3191606 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCC 3191547
Query 41765 TTGTCCATGATTTTTTGCTTCAACGACG-ACACA---GTGTCGCTCGACTCCACCTCCAC 41820
|| ||| ||| || ||| |||| | || ||||| || | ||| |||||||
Sbjct 3191546 TTATCCTGGATCTTGGCCTT----GACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAG 3191491
Query 41821 CGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|| || || || || || || ||||| ||||| |||||||||
Sbjct 3191490 GGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATG 3191448
Score = 129 bits (142), Expect = 5e-25
Identities = 163/224 (73%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704
||||| | || || || || ||| ||||||||| ||||| ||||| |||||||||||
Sbjct 3219848 AGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGG 3219789
Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764
| || || ||||||||||| || || ||||| | ||| ||||| | ||||| || ||||
Sbjct 3219788 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCC 3219729
Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824
|| ||| |||||| ||| | | | ||||| || | ||| ||||| | ||
Sbjct 3219728 TTATCCTGGATTTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGAGTG 3219669
Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTTATC 41868
|| || ||||| || || || || || || ||||||||||| ||
Sbjct 3219668 ATGGTCTTACCAGTTAGGGTTTTCACAAAGATCTGCATGTTTTC 3219625
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462283456366000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |