Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mchenga_20conophoros_20[genbank_20GCA_5F000150855.1_202008-07-09] 61,923 sequences; 73,425,564 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq59472 114 1e-20 >seq59472 Length=1933 Score = 114 bits (126), Expect = 1e-20 Identities = 104/127 (82%), Gaps = 3/127 (2%) Strand=Plus/Plus Query 116685 AGGTGGACCTGTCCAAGGACACG-AGCGACTGGGAGCGCTTGAACGACAACGAGCGCCAT 116743 ||||||| |||||||||||| | ||| ||||||| | |||| ||| | |||||| | Sbjct 402 AGGTGGATCTGTCCAAGGACCTGCAGC-ACTGGGATGCCATGAAGGACGAAGAGCGCTAC 460 Query 116744 TTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTG 116803 |||||| |||||| ||||||| || ||||||||||||||||||||||| ||||| ||| Sbjct 461 TTCATCTCCCACGTGTTGGCCTTCTTTGCCGCCAGCGACGGCATCGTCAATGAGAACCTG 520 Query 116804 GTCGAGC 116810 || |||| Sbjct 521 GT-GAGC 526 Score = 93.3 bits (102), Expect = 4e-14 Identities = 92/117 (79%), Gaps = 4/117 (3%) Strand=Plus/Plus Query 116803 GGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCA 116862 ||| ||||| ||| ||||| |||||||| | ||||| ||||| |||||||| || || Sbjct 603 GGTGGAGCGCTTCATGCAGGAAGTGCAGGTAACGGAGGCCCGGTGTTTCTACGGTTTCCA 662 Query 116863 GATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACC--CTCATCGACACGTAC 116917 |||||||||||||||| | ||||| || ||||| | || || ||| |||||||| Sbjct 663 GATCGCCATGGAGAACATCCACTCAGAGATGTA--CAGCCTGCTGATCAACACGTAC 717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514820401018480