Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mchenga_20conophoros_20[genbank_20GCA_5F000150855.1_202008-07-09] 61,923 sequences; 73,425,564 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq59472 86.0 1e-11 >seq59472 Length=1933 Score = 86.0 bits (94), Expect = 1e-11 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 42477 TTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATA 42536 |||||| | || |||||| ||||| || || |||||||| |||||||| ||||| Sbjct 613 TTCATGCAGGAAGTGCAGGTAACGGAGGCCCGGTGTTTCTACGGTTTCCAGATCGCCATG 672 Query 42537 GAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCC 42593 |||||| | ||||| ||| ||||| | ||| |||||||||||||| ||| ||| Sbjct 673 GAGAACATCCACTCAGAGATGTACAGCCTGCTGATCAACACGTACATCAAGGACCCC 729 Score = 86.0 bits (94), Expect = 1e-11 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668 ||||| || ||||| |||||| |||| ||| | ||||||||||| ||||||||||||||| Sbjct 838 CTGTTTAATGCCATCGAGACGCTGCCGTGCGTGAAGAAGAAGGCTGACTGGGCGCTCAAC 897 Query 42669 TGGATCG 42675 ||||||| Sbjct 898 TGGATCG 904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943608246046480