Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mchenga_20conophoros_20[genbank_20GCA_5F000150855.1_202008-07-09] 61,923 sequences; 73,425,564 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq61591 86.0 5e-11 >seq61591 Length=3210 Score = 86.0 bits (94), Expect = 5e-11 Identities = 168/246 (68%), Gaps = 2/246 (1%) Strand=Plus/Minus Query 551913 ACTGCTTGCGAAAGAGCCAA-ACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGT 551971 || ||||| || || || || | || || | || || | ||||| | | ||||| | Sbjct 2756 ACAGCTTGTGAGAGGGCAAAGAGGACCT-TATCCTCCAGCACTCAGGCAAGCATTGAGAT 2698 Query 551972 AGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGA 552031 || || | |||||||||||||||| | | || | || | ||||| ||||| || Sbjct 2697 CGACTCTCTCTTTGAGGGAATTGATTTTTACACCTCCATCACAAGGGCACGTTTTGAGGA 2638 Query 552032 TATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTC 552091 | || ||||| || || |||| ||| ||||| || ||| | ||| | Sbjct 2637 GCTCAACTCAGATCTTTTCAGGGGAACACTTGGCCCAGTTGAGAAAGCCCTGCAGGATGC 2578 Query 552092 AAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCC 552151 ||| | |||||||||| | ||||||||||| || |||||||| || ||||||||||| Sbjct 2577 CAAGCTGGATAAATCCAGGATTCATGAAATTGTCCTGGTTGGTGGCTCCACAAGAATTCC 2518 Query 552152 TAAAAT 552157 ||||| Sbjct 2517 CAAAAT 2512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4026021232487270