Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melanochromis_20auratus_20[genbank_20GCA_5F000150895.1_202008-07-09] 63,297 sequences; 68,238,634 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq14852 185 1e-41 >seq14852 Length=2113 Score = 185 bits (204), Expect = 1e-41 Identities = 489/744 (66%), Gaps = 2/744 (0%) Strand=Plus/Minus Query 196133 GAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTT 196192 ||||| || || ||||||| || | |||||||| || | || ||| | || || ||| Sbjct 1442 GAGATCGACTCTCTGTTTGAGGGCGTCGACTTCTACACCTCCATCACCAGGGCTCGCTTT 1383 Query 196193 GAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTC-G 196251 || ||| || ||| || |||| ||| |||| || || || |||| | | | Sbjct 1382 GAGGAGCTATGCTCCGACCTGTTCAGGGGAACCTTGGAGCCGGTGGAG-AAGTCCCTGAG 1324 Query 196252 TGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCG 196311 ||||| || |||| ||| || | | || | ||||| |||||||| || ||||| Sbjct 1323 GGACGCCAAACTGGACAAGGGACAGATCCACGATGTCGTCCTGGTGGGAGGCTCCACCCG 1264 Query 196312 TATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAAC 196371 || || || || || || |||| ||||||||| || | ||||| | Sbjct 1263 AATCCCCAAAATCCAGAAGCTGCTGCAGGACTTCTTCAACGGCCGGGAGCTGAACAAGAG 1204 Query 196372 GATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGG 196431 |||||||| || || || || ||||| || || ||||| ||||| || || ||||| || Sbjct 1203 CATCAACCCAGACGAGGCCGTGGCTTACGGCGCCGCCGTCCAGGCCGCCATCCTCTCGGG 1144 Query 196432 TGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGG 196491 || | | ||||| || || || ||||| || || || || || | |||||||| Sbjct 1143 TGACACCTCTGGCAACGTTCAGGACCTGCTGCTGCTGGACGTGGCGCCTCTGTCCCTGGG 1084 Query 196492 TCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGAC 196551 | | || || || || || |||||||| | || | | ||||| || || || || Sbjct 1083 TATCGAGACGGCCGGAGGGGTTATGACGGCCCTGATCAAACGCAACACCACCATCCCCAC 1024 Query 196552 TAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGT 196611 ||| || || ||| | || || ||||| || || || || || | || || || Sbjct 1023 CAAGCAGACCCAGACCTTCACCACCTACTCCGACAACCAGCCCGGCGTCCTGATCCAGGT 964 Query 196612 ATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGAC 196671 || |||||||| | || | ||||| ||| | || || || | || || |||| Sbjct 963 CTACGAAGGAGAGAGAGCCATGACCAAGGACAACAACCTGCTGGGCAAGTTTGAGCTGAC 904 Query 196672 GGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGC 196731 |||||| || | || || |||| || || ||||| | || || || || || || Sbjct 903 GGGGATCCCGCCCGCCCCGCGAGGCGTCCCGCAGATAGAGGTAACATTTGACATTGATGC 844 Query 196732 AAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGT 196791 || || |||||||| || | || | |||||| | |||||| | || || Sbjct 843 CAACGGCATTCTAAATGTATCCGCCGTGGACAAAAGCACCGGCAAAGAAAACAAAATCAC 784 Query 196792 GATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGC 196851 || |||||||||||||| || || || || || || || || ||||| || ||||| Sbjct 783 CATCACCAATGACAAGGGCCGCCTCAGCAAAGAAGAGATCGAGCGGATGGTGCAGGATGC 724 Query 196852 GGAAAAGTACAGGGAAGAAGACGA 196875 || ||||||| ||| || || || Sbjct 723 TGAGAAGTACAAGGATGATGATGA 700 Score = 86.0 bits (94), Expect = 8e-12 Identities = 179/266 (67%), Gaps = 1/266 (0%) Strand=Plus/Minus Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || || || |||| || || || |||||| | || || ||||| || || || || Sbjct 1852 GTCCCGGCATAGTTCAC-GACTCCCAGCGACAGCCCACTAAAGACGCGGCCGCCATCNCG 1794 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 || || ||| || | || ||||| || || || ||||| || | || || |||||| Sbjct 1793 GGCCTCAACGTCCTGAAGATCATCAACGAGCCCACGGCGGCCGCCTTCGCCTACGGTCTG 1734 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901 ||||| |||| | ||| | || || |||||| ||| || | ||| || || || Sbjct 1733 GACAAAGGCAAGTCAGGAGAGAGGAACGTCGTGATCTGTGACCTGGNTGGGGGCACCTTC 1674 Query 195902 GATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGAT 195961 || || || | || | || |||| ||||| || || || ||| | || || || || Sbjct 1673 GACGTGTCCATCCTGACCATCGAAGACGGTATCTTTGAGGTGAAGTCCACGGCCGGAGAC 1614 Query 195962 ACTCATCTAGGTGGTGAAGATTTCGA 195987 || || || || || || || || || Sbjct 1613 ACCCACCTGGGCGGAGAGGACTTTGA 1588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657341891045840