Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melanochromis_20auratus_20[genbank_20GCA_5F000150895.1_202008-07-09] 63,297 sequences; 68,238,634 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq34595 125 1e-22 seq53461 91.5 2e-12 >seq34595 Length=840 Score = 125 bits (138), Expect = 1e-22 Identities = 117/149 (79%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| |||||||| || ||||| || ||||||||| ||||||| || ||| ||| Sbjct 173 TGTACTTGGTCACGGCCTTTGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCACCGGGCA 114 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||||||||||||||||||||||| | || | ||| ||| ||||||||| | Sbjct 113 GCAGGAGGCGCACGGCGGTCTGGATCTCCCTGGAGGTGATGGTGGAGCGCTTGTTGTAGT 54 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATG 1485618 | ||||||||| ||| || | | ||||| Sbjct 53 GAGCCAGGCGGAAGGCTTCAGAGGCGATG 25 >seq53461 Length=1054 Score = 91.5 bits (100), Expect = 2e-12 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 796303 ACCTCCTCGGCGGTCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGG 796362 |||||||| ||||||| || ||||||| ||||| ||||||||||| ||| || | || Sbjct 659 ACCTCCTCCACGGTCCAGAAAGAGGCCTGGGCCTGTTTGTACATCTTCCAGATGTCTCGG 718 Query 796363 TAGCGGATGGGGAACAGAACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTC 796415 || ||||||| || | ||||| || |||||||||| || ||||| || || Sbjct 719 TACTGGATGGGAAAAATGACAAACCGCCTGGGGTTCTCTCGGAGCAGAGGTTC 771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7909513209412383