Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melanochromis_20auratus_20[genbank_20GCA_5F000150895.1_202008-07-09] 63,297 sequences; 68,238,634 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq61904 84.2 7e-11 >seq61904 Length=1909 Score = 84.2 bits (92), Expect = 7e-11 Identities = 120/162 (74%), Gaps = 9/162 (6%) Strand=Plus/Plus Query 349252 TGATCGTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGC 349311 |||| |||| || ||| |||| ||||| || || | | ||| || || || ||||| || Sbjct 3 TGAT-GTGTGGAGATA-TTGCCAATGACCAGGGAAGCCGAATCACCCCCTCCTACGTGGC 60 Query 349312 ATTTACC---GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCT--GCTGCT 349366 || ||| ||| ||||||| ||||||||||| |||| || |||| |||| ||| || Sbjct 61 CTTCACCAGTGAAGGTGAGCGTCTGATTGGTGATGCTGCCAAGAATC-AGCTGAGCT-CT 118 Query 349367 AATCCAAAAAATACGGTTTTTGATGCTAAGCGACTTATTGGT 349408 || || | || || |||||||||| ||| | || |||||| Sbjct 119 AACCCTGAGAACACTATTTTTGATGCAAAGAGGCTGATTGGT 160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514025539572491