Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melanochromis_20auratus_20[genbank_20GCA_5F000150895.1_202008-07-09] 63,297 sequences; 68,238,634 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq16799 116 9e-21 >seq16799 Length=7679 Score = 116 bits (128), Expect = 9e-21 Identities = 127/169 (75%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 7556 TTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGG 7615 |||| || || ||| |||| || ||||| ||||| || ||||||||| | || || || Sbjct 5499 TTTATAATGTAATTGTTACAGCACATGCTTTTGTAATAATTTTCTTTATAGTAATACCAA 5440 Query 7616 TTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGG 7675 ||||||| || || || ||||| ||| | || ||| | ||||||||||| || || || | Sbjct 5439 TTATGATTGGAGGCTTTGGAAACTGACTAGTGCCTCTTATGATTGGTGCACCCGACATAG 5380 Query 7676 CTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTT 7724 |||| || | | ||||||||||| || ||| | || || ||||| || Sbjct 5379 CTTTCCCTCGAATAAACAATATAAGCTTCTGACTCCTTCCCCCTTCATT 5331 Score = 89.7 bits (98), Expect = 1e-12 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 ||||||||||||||| |||||||| |||||||| ||||||||||| || ||||| || | Sbjct 4931 TTCAGGATGACCAAAGAATCAGAACAAATGTTGGTAAAGGATAGGGTCCCCTCCTCCAGC 4990 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTC 370760 || ||||| ||| | ||||| | |||| Sbjct 4991 AGGGTCAAAGAAGGTTGTATTGAGGTTTC 5019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1191564065768118