Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17]
6,294 sequences; 619,300,777 total letters
Query= NC_001317.1
Length=30624
Score E
Sequences producing significant alignments: (Bits) Value
seq2742 138 2e-28
>seq2742
Length=6849
Score = 138 bits (152), Expect = 2e-28
Identities = 591/918 (64%), Gaps = 31/918 (3%)
Strand=Plus/Minus
Query 2273 CACCAACTGGAACACGCCGAGGCCGAGGCCGGTTGCGTCAATGCCGATGTATTCGACGCT 2332
||||| | |||||| ||| |||| |||||| ||| |||||||||| | |||| |
Sbjct 2118 CACCAGGTCGAACACCCCGTAACCGACGCCGGTAATGTCGATGCCGATGTGCTGGACGTT 2059
Query 2333 GTATTTCTCGGTCAGTTTGCGGATGCCATCTGCCTGC-GCGGCAAAGTCCATGCCCTTCC 2391
| | |||| ||| || ||| | |||||| ||| || | | | ||| ||
Sbjct 2058 GAAGCGCTCGCACAGCTTCTCGATCTGCTTTGCCTGATGCGTGAACGACG-TCCCCCGCC 2000
Query 2392 ACTGGTGGCGCTCCAGCATGCGGAACTTGCCACCAGAAACCACCGGCGGCGCGAGCACGA 2451
| ||| |||||| || ||||||||||| || | ||| ||||| || | || |
Sbjct 1999 AGCTGTGCTTCTCCAGGATTCGGAACTTGCCGCCCGGCTCCAGGGGCGGGGCAACGACAA 1940
Query 2452 CGCACCCGGCGCTGTCGCCAGTGTGTGAC--GGGTCGTAGCCAATCCAGACGGGGCGAGA 2509
||||| ||| ||||| | || ||| ||||| || || | |||||| |||||
Sbjct 1939 CGCACGTCGCGTCGTCGC--GGGTTCGACTGGGGTCATACCCGAGCCAGACCGGGCGGTT 1882
Query 2510 GCCGAACGGATGGTCGGCGAACGGGGCGAAGTCCTCCCATTCTTCCATCACGTCGACCAT 2569
| ||||||| | | | |||| || |||| |||| ||| || || |
Sbjct 1881 GTCGAACGGCCGCGGGCTGTCCGGGTCGTAGTCAGTCCATAGGCCCAAGTCG--GAATA- 1825
Query 2570 GCAGCGCTGCAGCTCCTCGAACGGGAATACCGACGCTTTATCGTCGACAAACTCGCACAT 2629
|||||||| ||| || || | |||| | | | | ||||| |||| ||||||
Sbjct 1824 GCAGCGCTCCAGGTCGGTCAAGGCGAATGCAGCCTGGGTGCTGTCGATGAACTTGCACAT 1765
Query 2630 AAACAGGTTTTTAAAGTCCTCATCACTGTTTTCGCGTTTGAGTTGGTCGAGGTCGAACAG 2689
||||| | || ||| ||| || || || | | || | || |||||||||||
Sbjct 1764 GAACAGCTGTTCGAAGCGCTCTTCGTCGTACTCCAGCTGCAGGCGCTCCAGGTCGAACAG 1705
Query 2690 GGTGCAGCCACCGGCAAGGGCGTCCTCAATGGTGACAATCTGCCGCCACTGGCCATCGTC 2749
| ||||||| ||||| | |||||| | ||| |||| | || |||||||| || ||
Sbjct 1704 GTTGCAGCCGCCGGCGATGGCGTCTTGAATCGTGATGACCTTGCGCCACTGCCCGTCCGG 1645
Query 2750 GCAGAGCTGGCCACCGGCGAGC-GCGCGGTGACTGATGTCAATTTCGATGCGGTCGGCAA 2808
||| | | ||| | || | |||| | ||| | || || ||| | |
Sbjct 1644 GCACAACGCGCCGGCATGGATCTGCGCTTCG-CTGG-GCCA----CGGCCCGGCCTTCTT 1591
Query 2809 TACG-GCTGCGCCCCTTGTTGAACAGCTCGCCAGACCAGAAGGGATAAGCGCCGTGCGCC 2867
| || ||| | ||| |||| |||||| | |||| | ||||| || |||||
Sbjct 1590 TCCGCGCTTG--CTGTTGCGGAACTCCTCGCCGGTCCAGTACGGATATGCCTGGTGCGTT 1533
Query 2868 AGCGTTGAGGGTGTCGAAAAGTAGGTTGAGCGCAGATGCTTCTGCGAGGCCATGCCCGAG 2927
| || ||| || || |||||||| |||| | ||||||||||| | |
Sbjct 1532 ACCGCGCTGGGCGTGGAGAAGTAGGTCAGGCGCCACTTTGCATGCGAGGCCATCGCGCTG 1473
Query 2928 GCGACTTTGCGCAGCTTCTGAAAATTCGGGATCCAGAATATTTCATCGACATACAGGTCG 2987
|| || | |||||||||| ||||| ||||||||||| | ||| |||| || | || |
Sbjct 1472 GCCACCGTCTGCAGCTTCTGGAAATTGGGGATCCAGAACACTTCGTCGATGTAGACGTGG 1413
Query 2988 CCGTTATGGCTCTGAGCCGTGTTGGAGTTGGTACCGAGAAAAATCAGCTTTGC------- 3040
|||| | |||||| ||||||||| ||| || |||||| ||| | ||
Sbjct 1412 CCGTGGTAGCTCTGCGCCGTGTTGCTGTTCGTCGAGAGAAACCGCAGTTCCGCCCACGGC 1353
Query 3041 --GCCGTTGTTGCCAATGACAATCGGGTCGCCGGTCAGGTCGACGTC-AACCAGT-CGC- 3095
||||| |||| | || || || | ||||| ||| |||| || ||||| | |||
Sbjct 1352 TTGCCGTCTTTGCTCAAGATGATGGGATTGCCGGACAGCTCGATATCGAACCATTGCGCG 1293
Query 3096 GCAAACTGTATGATGTATTCGCGGAACACGTAAGCCTGCGTTTTACTGGCCGACAGAAAA 3155
|| ||| | |||||| ||||||||| | | ||| | || || ||||| |||
Sbjct 1292 GCGAACGCGACGATGTAGCTGCGGAACACTTCGGACTGGGCGCGGCTCGCGGACAGGAAA 1233
Query 3156 ATCTGGTTATGGCCGGTC 3173
|||||||| | ||||||
Sbjct 1232 ATCTGGTTGTCCCCGGTC 1215
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 97867884685208
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |