Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17]
6,294 sequences; 619,300,777 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq67 515 5e-141
seq30 93.3 5e-14
>seq67
Length=1635559
Score = 515 bits (570), Expect = 5e-141
Identities = 1293/1949 (66%), Gaps = 33/1949 (2%)
Strand=Plus/Minus
Query 53087 TTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTA 53146
||||| ||||| || ||||| | ||||| || | || | || ||||| |||||
Sbjct 33427 TTCTTCATCTCCTCGTTCCACAGCCCCCTCTCCGTCAGGTCTTTGAGCAGATGAGGATTC 33368
Query 53147 ACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCC 53206
|| | ||||| |||||||| | || || || ||||| || || ||||| || | |||
Sbjct 33367 ACGATCTGAAACTCTCCAGAGAGGACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCTTCG 33308
Query 53207 ACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAAT 53266
| |||||| || || |||| || || || || || || || ||||| || |||| || |
Sbjct 33307 ATAGACTCGTTGTTGCCCAGGATCTGTGCTGTGGAGGCCGTGGGCATCGGGGCCAGCAGT 33248
Query 53267 AAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAG-AGGTTCCCAATTCCAA-A 53324
| || || || | |||| | | ||| || || || || || |||| | ||||| |
Sbjct 33247 AGGCTGTTCCTCACGCCGTGTTTGGCGATCTTTTCCTTCAGCAGCTTCC--AGTCCAACA 33190
Query 53325 GATCCGACGGTACAACNNNNNNNNNNNNNNNT--TGTAGAATACCGTTACTGGCGTACGA 53382
|||| | || | | | || || || || || ||| | ||
Sbjct 33189 GATCGGTGGG--CGTCTTCTCCCACATGTCGTACTGGAGGATCCCCTTGCTGACCGGAGA 33132
Query 53383 TCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGC 53442
||| | || || ||||| || || || | || || || || |||||||| | ||
Sbjct 33131 GCCTTCGTACGTCTCGTAGGGGCCGAGCTCAGCGGCCAGCTCGCAGCTCGCCTCCAGGGC 33072
Query 53443 ACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAA 53502
|||| || ||||| || ||||| | | || || || || || |||| |||||
Sbjct 33071 GGCGTAGTAGATGGTCTCAAAGATTTGGATGTTCAGCAGCTGCGCCTCGGGGCTTTCAAA 33012
Query 53503 TGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCT 53562
|| ||| | || || || || || || || |||||||| || || || || || ||
Sbjct 33011 CGGGTAACGCATCAGGATGAAGGCATCCGCCAAACCTTGAACGCCGATTCCTATTGGCCT 32952
Query 53563 ATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTT 53622
|| | ||| || || | || ||||| || | ||||| | ||||| || || || ||
Sbjct 32951 GTGACGCTTGTTGGACTTCTCCGCTTCGGGCACTGGATAGAAGTTAATCTCGATGATCTT 32892
Query 53623 ATTGAGGTTTCTGACAATTACTTTGACCAC--ATCCTTCAGTTTGAGAAAATCAAATTGT 53680
|| | |||||||||||| |||||| ||| || || ||||| ||| ||||| ||
Sbjct 32891 GTTCAAGTTTCTGACAATGACTTTGGTCACAGATGCT--AGTTTTTTAAAGTCAAA-AGT 32835
Query 53681 C----CATCTATTACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTC 53736
| || | || ||||||| | ||||| || ||||||||||| || ||||||||
Sbjct 32834 CCGCTCAGGGGTGACGTACATGTTGAGCGCAATGGAGGCCAGATTACAGACCGCTACCTC 32775
Query 53737 ATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAA 53796
|| | | |||| | || || ||||| || || || | ||||| || || |
Sbjct 32774 ATCGTCGCTGGTGTATTCAACGATTTCTGTGCAGAGGTTGCTGCTTTTGATTGTGCCCAG 32715
Query 53797 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGT 53856
||| || || || |||||| ||| || || || || || || ||| | |||||||| ||
Sbjct 32714 ATTCTGCTGGTTGCTCTTTCGGTTGCAGGCGTCTTTGTACAGCATGTACGGCGTACCGGT 32655
Query 53857 TTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTA 53916
||| ||||||| || || || || | ||| || ||||||| | | | |||
Sbjct 32654 TTCTGTCTGGGACTCAATGATGGCGTGCCACACCTGCTGAGCCTTCACCACACGCTTGAC 32595
Query 53917 TCTCTTTTCTCTTTCGTAT--AGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTG 53974
||| || | || ||| |||||| | || |||||||| || |||||| | |
Sbjct 32594 CCTCCCCTCCTTCTCATATGAAGTGTAGAGCTTC--TCAAACTCCTCACCCCAACACTCG 32537
Query 53975 TCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTT--CACTC 54032
|||| || ||||| |||| |||||||||| ||||| ||| || | ||| |||||
Sbjct 32536 TCCAGCCCGGGACACTCATTGGGACACATCAGAGACCAGTCTTGGT--TGCTTTCCACTC 32479
Query 54033 GTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGTTCC 54091
||||| || | ||||| ||||| || || || ||| || ||||||| || || |||
Sbjct 32478 TCTTCATGAACAAGTCAGGGATCCACAGGGCGTAGAAA-AGGTCTCTGGCCCTCTGCTCC 32420
Query 54092 TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCC 54151
|| |||||||| ||||| || || || ||||| | | | ||| | |||||||| |||
Sbjct 32419 TCCTTTCCTGTGTTCTTCTTCAGCTCCAGGAAGTCAAACACATCGAAGTGCCACGGCTCC 32360
Query 54152 AAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 54211
| ||| |||| | |||| || | |||||| || ||||| || | || | || |||
Sbjct 32359 AGGTACATGGCGAAGGCTCCGGGTCTTTTGTTGCCGCCCTGGTCGACATAACGCGCCGTG 32300
Query 54212 TTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATA 54271
|| || |||||||||| ||| || | | || || || || || || |||| ||
Sbjct 32299 TTGTTGTAAACTCTCAGCATGGGGACTAACCCGTTTGAGTTGCCGTTTGTGCCGGCAATG 32240
Query 54272 TAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAG 54331
||||| || | | | || || | | | ||| || || || ||| || |||
Sbjct 32239 TAGCTCCCTGTTGATCTGATGCAGCTGACAGCCACACCGATTCCTCCAGCCGACTTTGAG 32180
Query 54332 ATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTA 54391
|| | || || | || | || || |||||||| || || || || ||| |||||
Sbjct 32179 ATGAGGGCACACTGCTTCAGAGTGTCGTAGATGCCTTCGATGCTGTCGTCCTTCATGGCG 32120
Query 54392 AGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAA 54451
|| || || ||||| |||| || | | | || || ||||| || | ||||| ||
Sbjct 32119 AGCAGGAAGCAGCTGGACAGCTGAGGCCTGTTGGTACCGGCATTGAAGAGAGTAGGCGAG 32060
Query 54452 GCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCC 54511
||||| || ||||| || || || || || ||||| ||||| || |||| ||| || |||
Sbjct 32059 GCGTGGGTGAACCACTTCTCCGACAGCAGGTTGTAGGTCTCAATGGCTGCGTCGATGTCC 32000
Query 54512 CATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 54571
| || || || || | || | ||| | ||||||||| |||| ||| | | |||
Sbjct 31999 GTTCTGTGGATGCCAACAGAAACCCTCATGAGCATGTGCTGGGGTCGTTCGGCCACTTTG 31940
Query 54572 TTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAA 54631
||| || ||||||| |||||| |||| ||| || || ||||| ||||||| ||
Sbjct 31939 CCGTTGATCTTCAGCAGGTAGGACCGCTCCAGAGTCTTGAAGCCAAAGAAGTTGTAGGAG 31880
Query 54632 AAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCC 54691
||||| || ||| |||| || | |||||||| || || | | | || | ||
Sbjct 31879 AAGTCACGGTCGAAAATGATGGCGGAGTTGAGGCGGTCTTTGTTCTCCTGGACAATGTCG 31820
Query 54692 ATGGTAATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTA--GGATTGACATAGTTA 54748
| || | ||| || || || ||||| || | | || | || |||||||||||
Sbjct 31819 AGCGT-CTCCTTGGAGATCATGGGAGA--GTGGCGTTTGTTCAAGGGGTTGACATAGTTG 31763
Query 54749 AATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACG 54808
| | |||| |||||| || || || | || || || |||||||| || ||||| |||
Sbjct 31762 TACAGGTCCTCCATCACGTCGCTGAACACCTTCTTGGTCTCTTTGTGCAGGTTTGAGACG 31703
Query 54809 GCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATT 54868
|| || | ||| || || || ||||| || || |||| || || |||||| || ||
Sbjct 31702 GCGATCCGAGCAGCGAGGATTGCATAGTCGGGGTGTTTGGTTGTGAGAGTGGCGGCGATC 31643
Query 54869 TCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACC 54928
|| || | ||| ||||| | || || || || || || | || | || || || |||
Sbjct 31642 TCAGCCGCCAGCGTGTCGAGCTCCACGGTGGTGACGCCGCTGTACAAACCCTGAATCACC 31583
Query 54929 TTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTA 54988
||||| | || | ||||| | | |||| ||| | || || || | ||
Sbjct 31582 TTCATCGTAATCTGGGCTGGATCCACAAAGTCAGAGTTCAGCCCGTAGCACAGCTTCTGG 31523
Query 54989 ATACGAGATGTGATTTTATCAAACATGAC 55017
|| || || ||||||||||| ||||||||
Sbjct 31522 ATGCGGGAGGTGATTTTATCGAACATGAC 31494
Score = 89.7 bits (98), Expect = 6e-13
Identities = 121/169 (72%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 52875 TCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 52934
|||| ||||| || ||||| || || |||||| || |||| || || || ||||| |
Sbjct 33720 TCCAGCCGTAGAAGTGCATGCTGGTCAGTTTGCCGTAGTTCGGCTCCGCAATGTGGATGT 33661
Query 52935 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 52994
||| || || || || ||||||||||| || | ||| || ||||| || | | ||||
Sbjct 33660 TCAGGGACTGGCTCTGGTCGATGAAGGCGCCACGGTCGGCTGCCATCTTGAGCACGGTCT 33601
Query 52995 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGG 53043
| || | || ||||| | |||||||| | |||| | ||| |||||
Sbjct 33600 TCTGGGAGATCTCCCACACGGTTTTATACAGCTGCTTCAGATCGTCTGG 33552
>seq30
Length=3550406
Score = 93.3 bits (102), Expect = 5e-14
Identities = 120/166 (72%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 54768 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 54827
|||| || | ||| || || |||||||| || || || ||||| |||| || || || |
Sbjct 771459 CACTGAACACTTTCTTGGTCTCTTTGTGCAGGTTAGACACGGCGATTCGTGCAGCGAGGA 771400
Query 54828 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCA 54887
|| || || ||||||| || || |||||| || | || |||| |||||||||||
Sbjct 771399 GTGCGTAGTCGGGATGTTTGGTGGTTAGAGTGGCGGCGGTCTCTGCTGCCAGAGTGTCCA 771340
Query 54888 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 54933
|| ||||| || |||||| | || | || ||||| || |||||
Sbjct 771339 GCTCCACCGTGGTGACTCCACTGTACAGACCCTGGATCACTTTCAT 771294
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593674888953120
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