Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq95 161 1e-34 >seq95 Length=1145539 Score = 161 bits (178), Expect = 1e-34 Identities = 142/177 (80%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 145746 CTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAA 145805 || ||| || |||| ||| |||| ||||||||| || || | |||||||| || ||||| Sbjct 863716 CTTGAGTCCTGTGATGTGTGCGATCATGTAGGTAAGAAGTGCATAGCTGGCGATATTGAA 863657 Query 145806 GGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCC 145865 |||||||| || ||||| || || ||||||||||||||||| || || ||||| || | Sbjct 863656 AGGCACCCCGAGGCCCATATCACCTGAGCGCTGGTACAGCTGACACGACAGCTCGCCATC 863597 Query 145866 CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTC 145922 |||||||||||| |||||| ||||||||| ||||| |||||| ||||||||| Sbjct 863596 GCACACGTAGAACTGACACAGGGCGTGGCAGGGGGGCAGAGCCATGAAGGGCAGGTC 863540 Score = 93.3 bits (102), Expect = 5e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 146040 GTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC 146099 |||| | || || ||||| ||||||||||| || || ||||| |||||||| || ||| Sbjct 863000 GTACTCTGCACCAAAGTGTCTCCACTGGAAGCCATACACGGGTCCCAGGTCGCCTTCCTC 862941 Query 146100 CCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTT 146159 || | | |||| | | |||||||| || ||||||||||||||||| ||||| Sbjct 862940 TCTATCTGTGAACCCGAGATTGTCCAGGAAGTCTCGAGACCCGTTGGCGTCCCAAATCTT 862881 Query 146160 GACGCCCCTCGCGGAGAGCTCATTGG 146185 || || || | |||||||| |||| Sbjct 862880 CACTCCTTTCTCAGAGAGCTCCTTGG 862855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590030375707760