Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq5752 87.8 2e-12 seq122 87.8 2e-12 >seq5752 Length=1069 Score = 87.8 bits (96), Expect = 2e-12 Identities = 173/254 (68%), Gaps = 4/254 (2%) Strand=Plus/Minus Query 83143 GAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTG 83202 ||||||||| |||||||| ||||| ||||| | ||| || || |||| | | || Sbjct 354 GAACTTCTCAAAGTTCCACGCCACATCGTTCCTGCAGACCGGGCTCCAGATGACTAACTT 295 Query 83203 GGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGTAGGAA 83262 |||||| | | || | || | |||||||| || | || || |||| ||||| Sbjct 294 GGGGTCAGTAATGAAGGCGCACGGCTCGTCGCTGGGGGATGGGAGACTTTCTCTCAGGAA 235 Query 83263 GGCGAAGAGCGGATGTGC--CCTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAAAG 83320 | || || | ||| || |||| | | || || || |||||| | |||| ||| Sbjct 234 CACAAACAGGGAATGGGCATCCTTTC--CATTCACATCCACCTTCTCCAGGAGCTGAAAC 177 Query 83321 TTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATTC 83380 || ||||| ||||| || ||||||||||||| |||||| || | ||| || ||||| Sbjct 176 TTTGGCTCAAAGCCATTTCCAGGACGGACGTACTTCAGAGACAAGAGGATTTCTTCATTC 117 Query 83381 TGGGCGTTTTCCTG 83394 | ||| ||||| Sbjct 116 TTACAGTTCTCCTG 103 >seq122 Length=783778 Score = 87.8 bits (96), Expect = 2e-12 Identities = 173/254 (68%), Gaps = 4/254 (2%) Strand=Plus/Plus Query 83143 GAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTG 83202 ||||||||| |||||||| ||||| ||||| | ||| || || |||| | | || Sbjct 469090 GAACTTCTCAAAGTTCCACGCCACATCGTTCCTGCAGACCGGGCTCCAGATGACTAACTT 469149 Query 83203 GGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGTAGGAA 83262 |||||| | | || | || | |||||||| || | || || |||| ||||| Sbjct 469150 GGGGTCAGTAATGAAGGCGCACGGCTCGTCGCTGGGGGATGGGAGACTTTCTCTCAGGAA 469209 Query 83263 GGCGAAGAGCGGATGTGC--CCTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAAAG 83320 | || || | ||| || |||| | | || || || |||||| | |||| ||| Sbjct 469210 CACAAACAGGGAATGGGCATCCTTTC--CATTCACATCCACCTTCTCCAGGAGCTGAAAC 469267 Query 83321 TTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATTC 83380 || ||||| ||||| || ||||||||||||| |||||| || | ||| || ||||| Sbjct 469268 TTTGGCTCAAAGCCATTTCCAGGACGGACGTACTTCAGAGACAAGAGGATTTCTTCATTC 469327 Query 83381 TGGGCGTTTTCCTG 83394 | ||| ||||| Sbjct 469328 TTACAGTTCTCCTG 469341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608748902911760