Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17]
6,294 sequences; 619,300,777 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq67 132 4e-26
seq331 91.5 1e-13
>seq67
Length=1635559
Score = 132 bits (146), Expect = 4e-26
Identities = 451/689 (65%), Gaps = 24/689 (3%)
Strand=Plus/Minus
Query 133275 GTGAACGGTTCGAAAGATTCGTTGTTGCCGAGTATCTGCGCCGTCGTCGCCGTGGGCATG 133334
||| | | ||||| ||| ||||||||||| || ||||| || || | |||||||||||
Sbjct 33319 GTGTAGGCTTCGATAGACTCGTTGTTGCCCAGGATCTGTGCTGTGGAGGCCGTGGGCATC 33260
Query 133335 TACGCCACCAACAAAGAGTTTCTTACGCCGTACTTGTTTATGTTGCACTGCAATTCGTTC 133394
|||| || | ||| || ||||||| ||| || || || || |||
Sbjct 33259 GGGGCCAGCAGTAGGCTGTTCCTCACGCCGTGTTTGGCGATCTTTTCCTTCAGCAGCTTC 33200
Query 133395 CAGTCCCACAGATTGTTGGAATGATAGACGCCGTTCTCGTCGTCGTAGTTGTGAAAATGC 133454
|||||| |||||| | ||| || | ||||| | | | || || | ||
Sbjct 33199 CAGTCCAACAGATCGGTGGG--------CGTC-TTCTC--CCACAT-GTCGT---ACTGG 33155
Query 133455 AAAATACCCCTGCTCACCGGACTGTCCGTGTACGATTCATAGGGTCCGTTGATTTTGGCC 133514
| || ||| |||| |||||| | | ||||| || ||||| ||| ||||
Sbjct 33154 AGGATCCCCTTGCTGACCGGAGAGCCTTCGTACGTCTCGTAGGGGCCGAGCTCAGCGGCC 33095
Query 133515 AGCTCGCAGCTAGCCTCCAAAGCGGCAAAGTAAATGGTTTCCGCGATT-GAATAGTTGAC 133573
||||||||||| ||||||| ||||| |||| ||||| || |||| | || ||| |
Sbjct 33094 AGCTCGCAGCTCGCCTCCAGGGCGGCGTAGTAGATGGTCTCAAAGATTTGGAT-GTTCA- 33037
Query 133574 GAACCTG-GCATCGTCGCTATCGTAGGCGATGTCG-AGAAGAACAAACGCGTCGGCCAAA 133631
| | ||| || ||| ||| || | | | | || | || | || || || ||||||
Sbjct 33036 GCAGCTGCGCCTCGGGGCTTTCAAACGGG-TAACGCATCAGGATGAAGGCATCCGCCAAA 32978
Query 133632 CCCTGTATGCCGACGCCGATGGGTCGATGTTTTTTATTGCTCCTCTCCGACTCGGCCGTG 133691
|| || | ||||| || || || | || || ||| | |||||| |||| |
Sbjct 32977 CCTTGAACGCCGATTCCTATTGGCCTGTGACGCTTGTTGGACTTCTCCGCTTCGGGCACT 32918
Query 133692 GGATAGTGGTTGACGTCGATGATCTTGTTGAGATTGCGGACGATAATTTTAGTCAAATGT 133751
|||||| ||| | |||||||||||||| | || | ||| || | ||| |||| | |
Sbjct 32917 GGATAGAAGTTAATCTCGATGATCTTGTTCAAGTTTCTGACAATGACTTTGGTCACAGAT 32858
Query 133752 TTCAGCAAAACATAGTCAAATGTCTTGGCGTCGACGTCGACGCACTTGTTGACGGCAATA 133811
|| | ||||||| ||| || | || |||| || |||||| |||||
Sbjct 32857 GCTAGTTTTTTAAAGTCAAAAGTCC--GCTCAGGGGT-GACGTACATGTTGAGCGCAATG 32801
Query 133812 CTGGCTAGATTACAAACGGCCGTCTCGTTCTCGTCGCAATACTGGACGATCTCGGCGCAG 133871
||| |||||||| || || ||| | ||| | || | ||||| || | ||||
Sbjct 32800 GAGGCCAGATTACAGACCGCTACCTCATCGTCGCTGGTGTATTCAACGATTTCTGTGCAG 32741
Query 133872 AGGTTGCTGCATTTGATGGTGCCCAAAtttttttGATTGCTAAAGTTATTGCAATGATCC 133931
|||||||||| |||||| ||||||| ||| | || ||||| ||||| ||
Sbjct 32740 AGGTTGCTGCTTTTGATTGTGCCCAGATTCTGCTGGTTGCTCTTTCGGTTGCAGGCGTCT 32681
Query 133932 TTGTATAGCATGTACGGCCCGCCGGTTTC 133960
||||| |||||||||||| ||||||||
Sbjct 32680 TTGTACAGCATGTACGGCGTACCGGTTTC 32652
>seq331
Length=323222
Score = 91.5 bits (100), Expect = 1e-13
Identities = 119/165 (72%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 118575 GTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATG 118634
||||| ||| || ||||| || || || |||| || | |||||| || || || |||
Sbjct 12944 GTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATG 13003
Query 118635 CCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCG 118694
|| |||||||| |||||| || || | || | |||||| || |||||||||
Sbjct 13004 CCTTCCTTGTCCTGAATTTTAGCCTTCACATTCTCAATGGTGTCGCTGGGCTCGACCTCA 13063
Query 118695 ACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
| ||| | || ||||| || || || || |||||||||||||||
Sbjct 13064 AGGGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAAATCTGCATG 13108
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433797121683448
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |