Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq32 98.7 2e-15 >seq32 Length=3442500 Score = 98.7 bits (108), Expect = 2e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 51893 GAGCATTATGGTTGTACTATATATCCAAAGGGATAGAATACTTGGATACGGTATTTTTCA 51952 |||| | |||| ||| | | || || || || || || ||||| ||||| ||||||| Sbjct 1258318 GAGCTCTGTGGTGGTATTTCGTCTCTAAGGGCATCGAGTATTTGGACACGGTGTTTTTCA 1258377 Query 51953 TACTTAGGAAAAAATTTAATCAGGTTAGTTTTCTACACGTATATCATCATTTTACTATGT 52012 | || ||||||||||| || ||||||| ||| || || || || || || | || |||| Sbjct 1258378 TCCTGAGGAAAAAATTCAACCAGGTTACTTTCCTGCATGTCTACCACCACTGCACCATGT 1258437 Query 52013 TTACTCTAGGATGGATAGGTATTAAATGGTTTGCTGGAGGTCAG 52056 | || || | ||||| || || |||||| | || ||||| ||| Sbjct 1258438 TCACGCTCTGGTGGATTGGCATCAAATGGGTGGCAGGAGGGCAG 1258481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923124167491760