Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq67 120 7e-22 >seq67 Length=1635559 Score = 120 bits (132), Expect = 7e-22 Identities = 385/593 (65%), Gaps = 7/593 (1%) Strand=Plus/Plus Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877 ||| | ||||||| ||||| || |||||| || || || || || || | ||||| Sbjct 31884 TACAACTTCTTTGGCTTCAAGACTCTGGAGCGGTCCTACCTGCTGAAGATCAACGGCAAA 31943 Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937 | | |||||| ||||||||| | ||| | || |||| || || |||| ||| Sbjct 31944 GTGGCCGAACGACCCCAGCACATGCTCATGAGGGTTTCTGTTGGCATCCACAGAACGGAC 32003 Query 248938 ATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACA 248997 || || | | ||||| |||| | || || ||| | || || ||| | Sbjct 32004 ATCGACGCAGCCATTGAGACCTACAACCTGCTGTCGGAGAAGTGGTTCACCCACGCCTCG 32063 Query 248998 CCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCC 249057 || || |||||||| ||||||||| || ||||||| | ||||| || || ||| Sbjct 32064 CCTACTCTCTTCAATGCCGGTACCAACAGGCCTCAGCTGTCCAGCTGCTTCCTGCTCGCC 32123 Query 249058 ATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACGGCGAAGATTTCT 249117 ||| | |||||| |||| ||||| || ||||| || || ||| || || || Sbjct 32124 ATGAAGGACGACAGCATCGAAGGCATCTACGACACTCTGAAGCAGTGTGCCCTCATCTCA 32183 Query 249118 AAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGA-AGGGTTCGTACAT 249176 || | || || ||||||||| | | ||| | |||| || | | |||| | ||||| Sbjct 32184 AAGTCGGCTGGAGGAATCGGTGTGGCTGTCAGCTGCATCAGATCAACAGGGAGC-TACAT 32242 Query 249177 CAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCAC 249236 || ||||| || | | || | || ||| | || || | | ||| Sbjct 32243 TGCCGGCACAAACGGCAACTCAAACGGGTTAGTCCCCATGCTGAGAGTTTACAACAACAC 32302 Query 249237 CGCCAGGTTCATCAACCAGGCCGGGCGCCGAAAG----GGGTCGTTCGCCATGTATTTGG 249292 || | | || |||||| ||| | | |||| || | ||||||||||| ||| Sbjct 32303 GGCGCGTTATGTCGACCAGGGCGG-CAACAAAAGACCCGGAGCCTTCGCCATGTACCTGG 32361 Query 249293 AAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGC 249352 | ||||||| |||| | || || |||||||| |||| ||||||| || || ||| Sbjct 32362 AGCCGTGGCACTTCGATGTGTTTGACTTCCTGGAGCTGAAGAAGAACACAGGAAAGGAGG 32421 Query 249353 TCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATG 249405 ||| || | ||||| ||||||| ||||||| || | |||||||||||| Sbjct 32422 AGCAGAGGGCCAGAGACCTTTTCTACGCCCTGTGGATCCCTGACTTGTTCATG 32474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073679809464192