Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq331 113 4e-20 seq1058 87.8 1e-12 >seq331 Length=323222 Score = 113 bits (124), Expect = 4e-20 Identities = 149/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| ||||||||| |||||||||||| || ||| | || ||||| || Sbjct 7725 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTG 7784 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || ||||| || |||| || ||| |||||||| || | || ||||| ||| || || Sbjct 7785 CTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCCTGGATCTT 7844 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | | |||| | ||| ||||| | ||| || |||||||| || Sbjct 7845 GGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCGGT 7904 Query 45313 CAGAGTCTTCACAAAGATTTGCATGTT 45339 || |||||||||||||| |||||||| Sbjct 7905 GAGGGTCTTCACAAAGATCTGCATGTT 7931 >seq1058 Length=86055 Score = 87.8 bits (96), Expect = 1e-12 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 45142 GCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGC 45201 |||| ||||||| |||||||||||| |||| ||| |||| ||||| || ||||| || Sbjct 27704 GCTCACCTTCTGGATGTTGTAGTCGGACAGTGTGCGTCCGTCCTCCAGCTGCTTTCCAGC 27763 Query 45202 GAATATCAACCGCTGTTGGTCGGGAGGCACACC 45234 ||| ||||||| ||| || |||||||| | ||| Sbjct 27764 GAAGATCAACCTCTGCTGATCGGGAGGGATACC 27796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395044894522174