Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq331 102 6e-17 >seq331 Length=323222 Score = 102 bits (112), Expect = 6e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || || | ||| || || || || || || ||||||||||||| | || | |||| Sbjct 7717 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 7776 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || ||||| ||| |||| || || || || || ||| | |||||||||||| Sbjct 7777 TCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCC 7836 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 || | |||||| | ||| ||||||| ||||||| |||| ||||||| | Sbjct 7837 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTC 7896 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTT 18329 |||||||| | || || ||||| || ||||| ||| Sbjct 7897 TTGCCGGTGAGGGTCTTCACAAAGATCTGCATGTTT 7932 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 18091 TTTGTTATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGT 18150 ||| || || |||| || | || || | ||| || || || || || || || |||| Sbjct 11269 TTTATTGACCGCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATATTGT 11328 Query 18151 AGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGAT 18210 |||||| | || | |||||||| ||| ||||| ||| |||| || || || || | Sbjct 11329 AGTCGGAGAGGGTGCGGCCATCTTCCAGTTGCTTGCCGGCAAAGATCAGCCTCTGCTGGT 11388 Query 18211 CCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGG 18270 | ||| | |||||||||||| || | |||||| | ||| |||||||| | Sbjct 11389 CAGGGGGAATGCCTTCCTTATCCTGGATCTTGGCCTTGACATTCTCAATAGTGTCACTTG 11448 Query 18271 GCTCGGTTTCAATGGTGATGCTTTTGCCGGTCA 18303 |||| |||| ||||||| | |||||||||| Sbjct 11449 GCTCAACCTCAAGGGTGATGGTCTTGCCGGTCA 11481 Score = 82.4 bits (90), Expect = 6e-11 Identities = 159/235 (68%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 18091 TTTGTTATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGT 18150 ||| || || |||| || | || || | ||| || || || || || || ||||| | Sbjct 7466 TTTATTGACCGCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTAT 7525 Query 18151 AGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGAT 18210 |||||| | || | |||||||| || ||||| ||| |||| || || || || | Sbjct 7526 AGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGT 7585 Query 18211 CCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGG 18270 | ||| | |||||||||||| || | |||||| | ||| ||||| | || Sbjct 7586 CGGGGGGAATGCCTTCCTTATCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTGG 7645 Query 18271 GCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| || | ||||||| | |||||||| | || || ||||| || ||||| Sbjct 7646 GCTCAACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 7700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379314901233030