Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq104 159 2e-34 >seq104 Length=942610 Score = 159 bits (176), Expect = 2e-34 Identities = 178/235 (76%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 91799 CATTTCCCTGTCTTTTCCTGCAAAGAGGACTACAACATCATCATGGACACTGTCAGACAA 91858 || ||||| ||| ||| | |||||||||||||||||||||| ||||| | | | ||| Sbjct 527536 CACTTCCCCACCTTCTCCAGGAAAGAGGACTACAACATCATCACAGACACAG-CGGCCAA 527478 Query 91859 -CTGGAACAAAGTGGCTTCTACTGGGGTCCTTTGGGGGTCGAGGAGGCACATCGTATGCT 91917 || || | || ||||||||||||||||||||||| || ||||| || ||||| ||| | Sbjct 527477 GCTTGAGCGCAGCGGCTTCTACTGGGGTCCTTTGGGAGTGGAGGACGCCCATCGCATGTT 527418 Query 91918 GCGCAACTCGGCACTGGGCAGCTTTCTCATTCGGGATAGCAGGCAAAAGGACGTCTTGTT 91977 | | || | | ||||| ||||| ||||| || || || | || || |||||||| || Sbjct 527417 GAGGGACGCTCCTCTGGGAAGCTTCCTCATCCGTGACAGTCGTCAGAAAGACGTCTTCTT 527358 Query 91978 CACGCTGTCGTATCACTCTGTGACCGGACCCGTCAGTGTGAGGATTGAATACAAG 92032 ||||||||| || ||| | || ||| || ||||| ||| | || || |||||| Sbjct 527357 CACGCTGTCCTACCACGCCAAGAGCGGTCCGGTCAGCGTGCGCATCGACTACAAG 527303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356206273988482