Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17]
6,294 sequences; 619,300,777 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq67 489 2e-133
seq30 96.9 5e-15
>seq67
Length=1635559
Score = 489 bits (542), Expect = 2e-133
Identities = 1311/1993 (66%), Gaps = 25/1993 (1%)
Strand=Plus/Minus
Query 71049 CTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATTCCATAATTTTCT 71108
|||||||||||| | |||| | | | || || ||||| || ||||| | ||
Sbjct 33458 CTGAATGGATCCGTTGTTGCCAATGAGCTTGTTCTTCATCTCCTCGTTCCACAGCCCCCT 33399
Query 71109 CTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCCAGACAATACTCT 71168
||| || | || | || ||||||||||| || | ||||| |||||||| | || ||
Sbjct 33398 CTCCGTCAGGTCTTTGAGCAGATGAGGATTCACGATCTGAAACTCTCCAGAGAGGACCCT 33339
Query 71169 ACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGC 71228
|| ||||| || || ||||| || | ||| | ||||| || || |||| || || ||
Sbjct 33338 GCGGGTGTAGATGTTGCTGGTGTAGGCTTCGATAGACTCGTTGTTGCCCAGGATCTGTGC 33279
Query 71229 AGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACCATGTGATCGGAT 71288
|| || || || ||||| || |||| || ||| || || || | || ||| |||
Sbjct 33278 TGTGGAGGCCGTGGGCATCGGGGCCAGCAGTAGGCTGTTCCTCACGCCGTGTTTGGCGAT 33219
Query 71289 TTTATCTTTTAG-AGATTCCCAATTCCAA-AGATCCGATGGTACAACNNNNNNNNNNNNN 71346
|| || || || || |||| | ||||| ||||| | ||
Sbjct 33218 CTTTTCCTTCAGCAGCTTCC--AGTCCAACAGATCGGTGGGCGTCTTCTCCCACATGTCG 33161
Query 71347 NNNNNNNNNATGCCGTTACT-AGCGTATGATCCTGCATATGTATCGTATGGTCCTTCTTT 71405
|| || || || | || | || ||| | || || ||||| || || |
Sbjct 33160 TACTGGAGGATCCCCTTGCTGACCGGA-GAGCCTTCGTACGTCTCGTAGGGGCCGAGCTC 33102
Query 71406 TTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTT 71465
|||| || || || |||||||| | || | || || ||||| || || || | |
Sbjct 33101 AGCGGCCAGCTCGCAGCTCGCCTCCAGGGCGGCGTAGTAGATGGTCTCAAAGATTTGGAT 33042
Query 71466 ATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGC 71525
|| || || || || ||||| ||||| || ||| | || || || || || ||
Sbjct 33041 GTTCAGCAGCTGCGCCTCGGGGCTTTCAAACGGGTAACGCATCAGGATGAAGGCATCCGC 32982
Query 71526 TAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGG 71585
|| ||||||||||| || || || || ||||| | ||| || || | || ||||| ||
Sbjct 32981 CAAACCTTGAACGCCGATTCCTATTGGCCTGTGACGCTTGTTGGACTTCTCCGCTTCGGG 32922
Query 71586 AATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACTATTACTTTGACCAC 71645
| ||||| | ||||| || || || || || | |||||||| || |||||| |||
Sbjct 32921 CACTGGATAGAAGTTAATCTCGATGATCTTGTTCAAGTTTCTGACAATGACTTTGGTCAC 32862
Query 71646 ATCCTTTAGTTTGAGAAAATCAAATCTCC---CATCTATTACAAACACGTTCAAGGCAAC 71702
| |||||| ||| ||||| ||| || | || ||| ||| | ||||
Sbjct 32861 AGATGCTAGTTTTTTAAAGTCAAAAGTCCGCTCAGGGGTGACGTACATGTTGAGCGCAAT 32802
Query 71703 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCA 71762
|| ||||||||||| || |||||||||| | || |||| | ||||| |||||
Sbjct 32801 GGAGGCCAGATTACAGACCGCTACCTCATCGTCGCTGGTGTATTCAACGATTTCTGTGCA 32742
Query 71763 AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 71822
|| || || | ||||| || || | ||| || || || |||||| ||| || || ||
Sbjct 32741 GAGGTTGCTGCTTTTGATTGTGCCCAGATTCTGCTGGTTGCTCTTTCGGTTGCAGGCGTC 32682
Query 71823 CTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 71882
|| || || || |||| ||||| ||||| |||| || || || || || | ||| ||
Sbjct 32681 TTTGTACAGCATGTACGGCGTACCGGTTTCTGTCTGGGACTCAATGATGGCGTGCCACAC 32622
Query 71883 GACTCGAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTAT--TGTGTATATAAT 71940
||||||| | | | |||| ||| || | || ||| ||||| | |
Sbjct 32621 CTGCTGAGCCTTCACCACACGCTTGACCCTCCCCTCCTTCTCATATGAAGTGTAGAGCTT 32562
Query 71941 CGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAAT 72000
| || ||||| || |||||| | ||| | || ||||| ||||| ||||||||||
Sbjct 32561 C--TCAAACTCCTCACCCCAACACTCGTCCAGCCCGGGACACTCATTGGGACACATCAGA 32504
Query 72001 GACCACTCTCCATCATCATTT--ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-T 72057
||||| ||| | | ||| |||| ||||| || | ||||| ||||| || || |
Sbjct 32503 GACCAGTCTTGGT--TGCTTTCCACTCTCTTCATGAACAAGTCAGGGATCCACAGGGCGT 32446
Query 72058 ATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 72117
| ||| || ||||||| || |||||||| |||||||| ||||| || || || |||||
Sbjct 32445 AGAAA-AGGTCTCTGGCCCTCTGCTCCTCCTTTCCTGTGTTCTTCTTCAGCTCCAGGAAG 32387
Query 72118 GCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTT 72177
| | | ||| | |||||||| |||| ||| ||||| | |||| || | ||||||
Sbjct 32386 TCAAACACATCGAAGTGCCACGGCTCCAGGTACATGGCGAAGGCTCCGGGTCTTTTGTTG 32327
Query 72178 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 72237
|| ||||| || | || | || ||||| || |||||||||| ||| || | | ||
Sbjct 32326 CCGCCCTGGTCGACATAACGCGCCGTGTTGTTGTAAACTCTCAGCATGGGGACTAACCCG 32267
Query 72238 TTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGAT 72297
|| || || || || |||| || ||||| || | | | || ||| | |
Sbjct 32266 TTTGAGTTGCCGTTTGTGCCGGCAATGTAGCTCCCTGTTGATCTGATGCAGCTGACAGCC 32207
Query 72298 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 72357
| ||| ||||| || ||| || ||||| | || || | || | || || ||||||
Sbjct 32206 ACACCGATTCCTCCAGCCGACTTTGAGATGAGGGCACACTGCTTCAGAGTGTCGTAGATG 32147
Query 72358 CCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTA 72417
|| || || || || ||| ||||| || || || ||||| |||| || | | |
Sbjct 32146 CCTTCGATGCTGTCGTCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGAGGCCTGTTG 32087
Query 72418 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTG 72477
|| || ||||| || | ||||| || ||||| || ||||| || || ||||| || |||
Sbjct 32086 GTACCGGCATTGAAGAGAGTAGGCGAGGCGTGGGTGAACCACTTCTCCGACAGCAGGTTG 32027
Query 72478 TACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAAC 72537
|| |||||||| |||| || || ||| | || || || || | || | ||| | |
Sbjct 32026 TAGGTCTCAATGGCTGCGTCGATGTCCGTTCTGTGGATGCCAACAGAAACCCTCATGAGC 31967
Query 72538 ATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAA 72597
|| ||||| |||| ||| | | ||| || || |||| || |||||| |||| |
Sbjct 31966 ATGTGCTGGGGTCGTTCGGCCACTTTGCCGTTGATCTTCAGCAGGTAGGACCGCTCCAGA 31907
Query 72598 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGT 72657
|| || || ||||| ||||||| || ||||| || ||| |||| || | || |||||
Sbjct 31906 GTCTTGAAGCCAAAGAAGTTGTAGGAGAAGTCACGGTCGAAAATGATGGCGGAGTTGAGG 31847
Query 72658 TTATCCTTATATTTGTTAACTATATCCATGGTGATACTT-GAAATAATCGGAGAATGTTT 72716
|| || | | | || || || | || | ||| || || || ||||| ||
Sbjct 31846 CGGTCTTTGTTCTCCTGGACAATGTCGAGCGT-CTCCTTGGAGATCATGGGAGA--GTGG 31790
Query 72717 CCCATTTTTA--GGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttt 72774
| | || | || || ||||||||| | | ||||||||||| || || || | ||
Sbjct 31789 CGTTTGTTCAAGGGGTTGACATAGTTGTACAGGTCCTCCATCACGTCGCTGAACACCTTC 31730
Query 72775 tttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGA 72834
|| || || ||||| || ||||| ||||| || | || || || || ||||| || ||
Sbjct 31729 TTGGTCTCTTTGTGCAGGTTTGAGACGGCGATCCGAGCAGCGAGGATTGCATAGTCGGGG 31670
Query 72835 TGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTTGTT 72894
|||| || || |||||| || || || || ||||| ||||| | || || || ||
Sbjct 31669 TGTTTGGTTGTGAGAGTGGCGGCGATCTCAGCCGCCAGCGTGTCGAGCTCCACGGTGGTG 31610
Query 72895 ACTCCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCA 72954
|| || | || | || || || |||||||| | || | ||||| | | |||
Sbjct 31609 ACGCCGCTGTACAAACCCTGAATCACCTTCATCGTAATCTGGGCTGGATCCACAAAGTCA 31550
Query 72955 GTGTTTAAGCCATAACATAATTTTCTAATACGAGACGTGATTTTATCAAACATAACATTT 73014
| ||| | || || || | || || || || ||||||||||| ||||| ||
Sbjct 31549 GAGTTCAGCCCGTAGCACAGCTTCTGGATGCGGGAGGTGATTTTATCGAACATGACGCGC 31490
Query 73015 TCCCGGCATCCAT 73027
||| ||| |||||
Sbjct 31489 TCCTGGCGTCCAT 31477
Score = 93.3 bits (102), Expect = 6e-14
Identities = 122/169 (72%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 70868 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATAT 70927
|||| ||||| || ||||| || || |||||| ||| | || || || ||||| || |
Sbjct 33720 TCCAGCCGTAGAAGTGCATGCTGGTCAGTTTGCCGTAGTTCGGCTCCGCAATGTGGATGT 33661
Query 70928 TCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 70987
||| ||||| || || ||||||||||| || | ||| || ||||| || | | ||||
Sbjct 33660 TCAGGGACTGGCTCTGGTCGATGAAGGCGCCACGGTCGGCTGCCATCTTGAGCACGGTCT 33601
Query 70988 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGG 71036
| || | || ||||| | |||||||| | |||| | ||| |||||
Sbjct 33600 TCTGGGAGATCTCCCACACGGTTTTATACAGCTGCTTCAGATCGTCTGG 33552
>seq30
Length=3550406
Score = 96.9 bits (106), Expect = 5e-15
Identities = 121/166 (73%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 72761 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAA 72820
|||| || | ||| || || || ||||| || || || ||||| |||| || || || |
Sbjct 771459 CACTGAACACTTTCTTGGTCTCTTTGTGCAGGTTAGACACGGCGATTCGTGCAGCGAGGA 771400
Query 72821 TGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCA 72880
|| || || ||||||| || || |||||| || | |||||||||||||||||||
Sbjct 771399 GTGCGTAGTCGGGATGTTTGGTGGTTAGAGTGGCGGCGGTCTCTGCTGCCAGAGTGTCCA 771340
Query 72881 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 72926
|| ||||| || |||||| | || | || ||||| || |||||
Sbjct 771339 GCTCCACCGTGGTGACTCCACTGTACAGACCCTGGATCACTTTCAT 771294
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671086398123440
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