Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17]
6,294 sequences; 619,300,777 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq67 122 1e-22
seq30 93.3 6e-14
>seq67
Length=1635559
Score = 122 bits (134), Expect = 1e-22
Identities = 346/528 (66%), Gaps = 24/528 (5%)
Strand=Plus/Plus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866
|||||||||||| | | || |||| || ||||| ||| | ||||| | | | ||
Sbjct 32250 ACAAACGGCAACTCAAACGGGTTAGTCCCCATGCTGAGAGTTTACAACAACACGGCGCGT 32309
Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926
|| || ||||||||||| ||| | || || || | ||| | ||| |||| || |||
Sbjct 32310 TATGTCGACCAGGGCGGCAACAAAAGACCCGGAGCCTTCGCCATGTACCTGGAGCCGTGG 32369
Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986
||| || || |||||||| | ||| || || ||| | || || ||| |
Sbjct 32370 CACTTCGATGTGTTTGACTTCCTGGAGCTGAAGAAGAACACAGGAAAGGAGGAGCAGAGG 32429
Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT------C 97040
||||| ||| | || || || || ||| | || || |||||||||||| | || |
Sbjct 32430 GCCAGAGACCTTTTCTACGCCCTGTGGATCCCTGACTTGTTCATGAAGAGAGTGGAAAGC 32489
Query 97041 AACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGC 97100
||| | | ||||| || ||||| ||| | || ||||| ||| ||| ||
Sbjct 32490 AACCAAG------ACTGGTCTCTGATGTGTCCCAATGAGTGTCCCGGGCTGGACGAGTGT 32543
Query 97101 TGGGGCGAAGAGTTTGAGGCCAAG---TACACGGCCTACGAGCAAGAGGGCCGATACGTG 97157
||||| || ||||||||| ||| ||||| | || ||| | ||||| || ||
Sbjct 32544 TGGGGTGAGGAGTTTGAG---AAGCTCTACACTTCATATGAGAAGGAGGG--GA-GGGTC 32597
Query 97158 AGACGAGTCG---ATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACT 97214
| || || | | || | | ||||| | |||||| | | | ||| ||| ||
Sbjct 32598 AAGCGTGTGGTGAAGGCTCAGCAGGTGTGGCACGCCATCATTGAGTCCCAGACAGAAACC 32657
Query 97215 GGAACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTG 97274
|| || |||||||| || ||||| || || || || || |||||||| | | ||
Sbjct 32658 GGTACGCCGTACATGCTGTACAAAGACGCCTGCAACCGAAAGAGCAACCAGCAGAATCTG 32717
Query 97275 GGCACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCC 97322
||||| ||||| || ||| || ||||| ||||| || || ||| ||
Sbjct 32718 GGCACAATCAAAAGCAGCAACCTCTGCACAGAAATCGTTGAATACACC 32765
>seq30
Length=3550406
Score = 93.3 bits (102), Expect = 6e-14
Identities = 105/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 97179 CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAG 97238
|||||| | |||||| | | ||||| || || ||||| |||||||| || ||||||
Sbjct 773211 CTGTGGTACGCCATCATCGAGTCTCAGACGGAAACGGGAACCCCGTACATGCTTTACAAG 773270
Query 97239 GATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTG 97298
||| || ||| | || |||||||| | || ||||||||||||| | ||| |||
Sbjct 773271 GATGCCTGCAATGGGAAGAGCAACCAGCAGAACCTGGGCACCATCAAATCCAGCAACCTG 773330
Query 97299 TGCACGGAAATTGTAGAGTAC 97319
||||| || || |||||||||
Sbjct 773331 TGCACAGAGATCGTAGAGTAC 773351
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741000897167440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |