Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq67 122 1e-22 seq30 93.3 6e-14 >seq67 Length=1635559 Score = 122 bits (134), Expect = 1e-22 Identities = 346/528 (66%), Gaps = 24/528 (5%) Strand=Plus/Plus Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866 |||||||||||| | | || |||| || ||||| ||| | ||||| | | | || Sbjct 32250 ACAAACGGCAACTCAAACGGGTTAGTCCCCATGCTGAGAGTTTACAACAACACGGCGCGT 32309 Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926 || || ||||||||||| ||| | || || || | ||| | ||| |||| || ||| Sbjct 32310 TATGTCGACCAGGGCGGCAACAAAAGACCCGGAGCCTTCGCCATGTACCTGGAGCCGTGG 32369 Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986 ||| || || |||||||| | ||| || || ||| | || || ||| | Sbjct 32370 CACTTCGATGTGTTTGACTTCCTGGAGCTGAAGAAGAACACAGGAAAGGAGGAGCAGAGG 32429 Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT------C 97040 ||||| ||| | || || || || ||| | || || |||||||||||| | || | Sbjct 32430 GCCAGAGACCTTTTCTACGCCCTGTGGATCCCTGACTTGTTCATGAAGAGAGTGGAAAGC 32489 Query 97041 AACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGC 97100 ||| | | ||||| || ||||| ||| | || ||||| ||| ||| || Sbjct 32490 AACCAAG------ACTGGTCTCTGATGTGTCCCAATGAGTGTCCCGGGCTGGACGAGTGT 32543 Query 97101 TGGGGCGAAGAGTTTGAGGCCAAG---TACACGGCCTACGAGCAAGAGGGCCGATACGTG 97157 ||||| || ||||||||| ||| ||||| | || ||| | ||||| || || Sbjct 32544 TGGGGTGAGGAGTTTGAG---AAGCTCTACACTTCATATGAGAAGGAGGG--GA-GGGTC 32597 Query 97158 AGACGAGTCG---ATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACT 97214 | || || | | || | | ||||| | |||||| | | | ||| ||| || Sbjct 32598 AAGCGTGTGGTGAAGGCTCAGCAGGTGTGGCACGCCATCATTGAGTCCCAGACAGAAACC 32657 Query 97215 GGAACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTG 97274 || || |||||||| || ||||| || || || || || |||||||| | | || Sbjct 32658 GGTACGCCGTACATGCTGTACAAAGACGCCTGCAACCGAAAGAGCAACCAGCAGAATCTG 32717 Query 97275 GGCACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCC 97322 ||||| ||||| || ||| || ||||| ||||| || || ||| || Sbjct 32718 GGCACAATCAAAAGCAGCAACCTCTGCACAGAAATCGTTGAATACACC 32765 >seq30 Length=3550406 Score = 93.3 bits (102), Expect = 6e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 97179 CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAG 97238 |||||| | |||||| | | ||||| || || ||||| |||||||| || |||||| Sbjct 773211 CTGTGGTACGCCATCATCGAGTCTCAGACGGAAACGGGAACCCCGTACATGCTTTACAAG 773270 Query 97239 GATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTG 97298 ||| || ||| | || |||||||| | || ||||||||||||| | ||| ||| Sbjct 773271 GATGCCTGCAATGGGAAGAGCAACCAGCAGAACCTGGGCACCATCAAATCCAGCAACCTG 773330 Query 97299 TGCACGGAAATTGTAGAGTAC 97319 ||||| || || ||||||||| Sbjct 773331 TGCACAGAGATCGTAGAGTAC 773351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741000897167440