Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq95 114 9e-21 >seq95 Length=1145539 Score = 114 bits (126), Expect = 9e-21 Identities = 126/168 (75%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 |||||| ||||||||||| || || | ||||||||||| || ||||| ||||| ||||| Sbjct 863009 CATGTCTGTGTACTCTGCACCAAAGTGTCTCCACTGGAAGCCATACACGGGTCCCAGGTC 862950 Query 25833 TCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTC 25892 || || || || | || || || |||| ||||||| || || |||||||| Sbjct 862949 GCCTTCCTCTCTATCTGTGAACCCGAGATTGTCCAGGAAGTCTCGAGACCCGTTGGCGTC 862890 Query 25893 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 25940 ||| ||||| || || ||||| |||||||| |||| ||||| || || Sbjct 862889 CCAAATCTTCACTCCTTTCTCAGAGAGCTCCTTGGCATTTGTTGATCC 862842 Score = 111 bits (122), Expect = 1e-19 Identities = 123/163 (75%), Gaps = 1/163 (1%) Strand=Plus/Minus Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565 || |||||||| || || || ||||||||||| || || || ||||||| ||||| Sbjct 863697 GCGATCATGTAGGTAAGAAGTGCATAGCTGGCGATATTGAAAGGCACCCCGAGGCCCATA 863638 Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACA 25625 || || || | |||||| ||||||||||| ||||| | |||| |||||| |||||||| Sbjct 863637 TCACCT-GAGCGCTGGTACAGCTGACACGACAGCTCGCCATCGCACACGTAGAACTGACA 863579 Query 25626 CATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCTTTA 25668 || || || ||| || || ||||| || | | || |||| || Sbjct 863578 CAGGGCGTGGCAGGGGGGCAGAGCCATGAAGGGCAGGTCTGTA 863536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340111508682462