Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq67 201 3e-46 >seq67 Length=1635559 Score = 201 bits (222), Expect = 3e-46 Identities = 579/872 (66%), Gaps = 24/872 (3%) Strand=Plus/Plus Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507 ||||| || ||||| ||| | ||| | ||| || |||| ||||| | |||| | || Sbjct 31950 GAACGACCCCAGCACATGCTCATGAGGGTTTCTGTTGGCATCCACAGAACGGACATCGAC 32009 Query 363508 GCCGCGATTGAAACATATAAGCTTCTAAGTGCTC-GTGTATTCACGCACGCCACGCCAAC 363566 || || ||||| || || || || || | ||| ||||| |||||| |||| || Sbjct 32010 GCAGCCATTGAGACCTACAACCTGCTGTCGGAGAAGTGG-TTCACCCACGCCTCGCCTAC 32068 Query 363567 AATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAA 363626 | | |||||| || || | || ||| |||| ||||| || || ||||| Sbjct 32069 TCTCTTCAATGCCGGTACCAACAGGCCTCAGCTGTCCAGCTGCTTCCTGCTCGCCATGAA 32128 Query 363627 GGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAA 363686 |||||| |||||| || |||| ||||| || ||| | ||||| || || || ||| Sbjct 32129 GGACGACAGCATCGAAGGCATCTACGACACTCTGAAGCAGTGTGCCCTCATCTCAAAGTC 32188 Query 363687 TGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCA-CAGAACAGTTACATTCGCG 363745 || || ||||| ||||| | || | | | || ||| || |||||| || Sbjct 32189 GGCTGGAGGAATCGGTGTGGCTGTCAGCTGCATCAGATCAACAGGG-AGCTACATTGCCG 32247 Query 363746 GCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGA 363805 ||||| || |||| || ||| | || |||||||| | || | |||| || ||| Sbjct 32248 GCACAAACGGCAACTCAAACGGGTTAGTCCCCATGCTGAGAGTTTACAACAACACGGCGC 32307 Query 363806 GGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863 | || ||||||||||| || | |||| | || || || || ||||| || ||||| Sbjct 32308 GTTATGTCGACCAGGGCGGCAACAAAAGACCC--GGAGCCTTCGCCATGTACCTGGAGCC 32365 Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATT 363923 || |||| | ||||| || || ||||| ||| ||||| ||||| ||||| Sbjct 32366 GTGGCACTTCGATGTGTTTGACTTCCTGGAGCTGAAGAAGAACACAGGAAAGGAGGAGCA 32425 Query 363924 GCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGA 363983 | | || | || || ||||| || || ||| | ||||| || |||||| | ||||| Sbjct 32426 GAGGGCCAGAGACCTTTTCTACGCCCTGTGGATCCCTGACTTGTTCATGAAGAGAGTGGA 32485 Query 363984 G-GCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGA-TGTA 364041 ||| |||| | |||| || | || || | || ||||| || || ||| ||| Sbjct 32486 AAGCAACCAAGACT-GGTCTCTGATGTGTCCCAATGAGTGTCCCGGGCTGGACGAGTGT- 32543 Query 364042 TGGGGTGACGACTATGTT--GCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCT---C 364096 |||||||| || | || |||||| || | ||||| |||||| | || | Sbjct 32544 TGGGGTGAGGAGTTTGAGAAGCTCTACACTTCA--TATGAGAAGGAGGGGAGGGTCAAGC 32601 Query 364097 GTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAG 364156 || | | || ||| || | ||| |||||||| || || |||| || || | Sbjct 32602 GTGTGGTGAAG---GCTCAGCAGGTGTGGCACGCCATCATTGAGTCCCAGACAGAAACCG 32658 Query 364157 GAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTG 364216 | || || || ||| |||||||||| | |||||||| ||| |||||||||| | || | Sbjct 32659 GTACGCCGTACATGCTGTACAAAGACGCCTGCAACCGAAAGAGCAACCAGCAGAATCTGG 32718 Query 364217 GTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAG 364275 | ||||| || || |||||||| || || || || ||||||||||| ||| ||| Sbjct 32719 GCACAAT-CAAAAGCAGCAACCTCTGCACAGAAATCGTTGAATACACCAGCGACGATGAG 32777 Query 364276 ACTGCCGTATGTAACCTTGCGTCGATCGCGCT 364307 || || ||||| || || || || ||||| Sbjct 32778 GTAGCGGTCTGTAATCTGGCCTCCATTGCGCT 32809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303248495121908