Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17]
6,294 sequences; 619,300,777 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq67 531 6e-146
seq30 93.3 5e-14
>seq67
Length=1635559
Score = 531 bits (588), Expect = 6e-146
Identities = 1316/1980 (66%), Gaps = 33/1980 (2%)
Strand=Plus/Minus
Query 62098 CTGAATGGATCCACCATCTGCCA-TAATCCTATTCTTGATCTCATCATTCCATAATTTTC 62156
|||||||||||| | ||||| | | | | ||||| ||||| || ||||| | |
Sbjct 33458 CTGAATGGATCCGTTGT-TGCCAATGAGCTTGTTCTTCATCTCCTCGTTCCACAGCCCCC 33400
Query 62157 TCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTC 62216
|||| || | || | || ||||| ||||| || | ||||| |||||||| | || |
Sbjct 33399 TCTCCGTCAGGTCTTTGAGCAGATGAGGATTCACGATCTGAAACTCTCCAGAGAGGACCC 33340
Query 62217 TCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAG 62276
| || ||||| || || ||||| || | ||| | |||||| || || |||| || || |
Sbjct 33339 TGCGGGTGTAGATGTTGCTGGTGTAGGCTTCGATAGACTCGTTGTTGCCCAGGATCTGTG 33280
Query 62277 CAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGA 62336
| || || || || ||||| || |||| || || || || || | |||| | | ||
Sbjct 33279 CTGTGGAGGCCGTGGGCATCGGGGCCAGCAGTAGGCTGTTCCTCACGCCGTGTTTGGCGA 33220
Query 62337 TTTTATCTTTTAG-AGGTTCCCAATTCCAA-AGATCCGACGGTACAACNNNNNNNNNNNN 62394
| || || || || || |||| | ||||| ||||| | || | |
Sbjct 33219 TCTTTTCCTTCAGCAGCTTCC--AGTCCAACAGATCGGTGGG--CGTCTTCTCCCACATG 33164
Query 62395 NNNT--TGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCC 62452
| || || || || || ||| | || ||| | || || ||||| || || |
Sbjct 33163 TCGTACTGGAGGATCCCCTTGCTGACCGGAGAGCCTTCGTACGTCTCGTAGGGGCCGAGC 33104
Query 62453 TTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTC 62512
| | || || || || |||||||| | || |||| || ||||| || ||||| |
Sbjct 33103 TCAGCGGCCAGCTCGCAGCTCGCCTCCAGGGCGGCGTAGTAGATGGTCTCAAAGATTTGG 33044
Query 62513 TTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCT 62572
| || || ||||| || |||| ||||| || ||| | || || || || ||
Sbjct 33043 ATGTTCAGCAGCTGCGCCTCGGGGCTTTCAAACGGGTAACGCATCAGGATGAAGGCATCC 32984
Query 62573 GCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCT 62632
|| || |||||||| || || || || || || || | ||| || || | || |||||
Sbjct 32983 GCCAAACCTTGAACGCCGATTCCTATTGGCCTGTGACGCTTGTTGGACTTCTCCGCTTCG 32924
Query 62633 GGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACC 62692
|| | ||||| | ||||| || || || || || | ||||||||||| |||||| |
Sbjct 32923 GGCACTGGATAGAAGTTAATCTCGATGATCTTGTTCAAGTTTCTGACAATGACTTTGGTC 32864
Query 62693 AC--ATCCTTCAGTTTGAGAAAATCAAA---TCGCCCATCTATTACAAACATGTTCAATG 62747
|| || || ||||| ||| ||||| ||| || | || ||||||| | |
Sbjct 32863 ACAGATGCT--AGTTTTTTAAAGTCAAAAGTCCGCTCAGGGGTGACGTACATGTTGAGCG 32806
Query 62748 CAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAG 62807
||| || ||||||||||| || |||||||||| | | |||| | || || |
Sbjct 32805 CAATGGAGGCCAGATTACAGACCGCTACCTCATCGTCGCTGGTGTATTCAACGATTTCTG 32746
Query 62808 TGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACG 62867
|||| || || || | ||||| || || | ||| || || || |||||| ||| || |
Sbjct 32745 TGCAGAGGTTGCTGCTTTTGATTGTGCCCAGATTCTGCTGGTTGCTCTTTCGGTTGCAGG 32686
Query 62868 CATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCC 62927
| || || || || ||| | || ||||| ||||| |||| || || || || || | ||
Sbjct 32685 CGTCTTTGTACAGCATGTACGGCGTACCGGTTTCTGTCTGGGACTCAATGATGGCGTGCC 32626
Query 62928 AGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTAT--AGTGTATA 62985
| || ||||||| | | | ||| ||| || | || ||| |||||| |
Sbjct 32625 ACACCTGCTGAGCCTTCACCACACGCTTGACCCTCCCCTCCTTCTCATATGAAGTGTAGA 32566
Query 62986 CAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACAT 63045
|| || ||||| || |||||| | |||||| || ||||| |||| ||||||||
Sbjct 32565 GCTTC--TCAAACTCCTCACCCCAACACTCGTCCAGCCCGGGACACTCATTGGGACACAT 32508
Query 63046 CAACGACCACTCTCCGTCATCCTT--CACTCGTTTCATAAAGAGATCAGGAATCCAAAGA 63103
|| ||||| ||| || | ||| ||||| ||||| || | ||||| ||||| ||
Sbjct 32507 CAGAGACCAGTCTTGGT--TGCTTTCCACTCTCTTCATGAACAAGTCAGGGATCCACAGG 32450
Query 63104 GC-TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 63162
|| || ||| || ||||||| || || ||||| |||||||| ||||| || || || ||
Sbjct 32449 GCGTAGAAA-AGGTCTCTGGCCCTCTGCTCCTCCTTTCCTGTGTTCTTCTTCAGCTCCAG 32391
Query 63163 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTT 63222
||| | | | ||| | |||||||| |||| ||| ||||| | |||| || | |||
Sbjct 32390 GAAGTCAAACACATCGAAGTGCCACGGCTCCAGGTACATGGCGAAGGCTCCGGGTCTTTT 32331
Query 63223 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 63282
||| || ||||| || | || | || ||||| || |||||||||| ||| || | |
Sbjct 32330 GTTGCCGCCCTGGTCGACATAACGCGCCGTGTTGTTGTAAACTCTCAGCATGGGGACTAA 32271
Query 63283 ACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAAT 63342
|| || || | || || || || | || ||||| || | | | || || |
Sbjct 32270 CCCGTTTGAGTTGCCGTTTGTGCCGGCAATGTAGCTCCCTGTTGATCTGATGCAGCTGAC 32211
Query 63343 TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATA 63402
| | ||| ||||| || ||| || ||||| | || || | || | || || ||
Sbjct 32210 AGCCACACCGATTCCTCCAGCCGACTTTGAGATGAGGGCACACTGCTTCAGAGTGTCGTA 32151
Query 63403 GATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACG 63462
|||||| || || || || ||| ||||| || || || ||||| |||| || | |
Sbjct 32150 GATGCCTTCGATGCTGTCGTCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGAGGCCT 32091
Query 63463 ACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAG 63522
| || || ||||| || | ||||| || ||||| || ||||| || || || || ||
Sbjct 32090 GTTGGTACCGGCATTGAAGAGAGTAGGCGAGGCGTGGGTGAACCACTTCTCCGACAGCAG 32031
Query 63523 ATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCAT 63582
||||| |||||||| |||| ||| || ||| | || || || || | || | |||
Sbjct 32030 GTTGTAGGTCTCAATGGCTGCGTCGATGTCCGTTCTGTGGATGCCAACAGAAACCCTCAT 31971
Query 63583 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTC 63642
| ||||||||| |||| ||| | | ||| ||| || |||| || |||||| ||
Sbjct 31970 GAGCATGTGCTGGGGTCGTTCGGCCACTTTGCCGTTGATCTTCAGCAGGTAGGACCGCTC 31911
Query 63643 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 63702
|| ||| || || ||||| ||||||| || ||||| || ||| |||| || | |||||
Sbjct 31910 CAGAGTCTTGAAGCCAAAGAAGTTGTAGGAGAAGTCACGGTCGAAAATGATGGCGGAGTT 31851
Query 63703 GAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTT-GAAATAATAGGAAAAT 63761
||| || || | | | || | || | || | ||| || || || ||| |
Sbjct 31850 GAGGCGGTCTTTGTTCTCCTGGACAATGTCGAGCGT-CTCCTTGGAGATCATGGGAGA-- 31794
Query 63762 GTTTCCCATTTTTA--GGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAG 63819
|| | | || | || |||||||||||| | | ||||||||||| || || || |
Sbjct 31793 GTGGCGTTTGTTCAAGGGGTTGACATAGTTGTACAGGTCCTCCATCACGTCGCTGAACAC 31734
Query 63820 tttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATC 63879
|| || || |||||||| || ||||| ||||| || | ||| || || || ||||| ||
Sbjct 31733 CTTCTTGGTCTCTTTGTGCAGGTTTGAGACGGCGATCCGAGCAGCGAGGATTGCATAGTC 31674
Query 63880 CGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGT 63939
|| |||| || || |||||| || || || || ||||| ||||| | || || ||
Sbjct 31673 GGGGTGTTTGGTTGTGAGAGTGGCGGCGATCTCAGCCGCCAGCGTGTCGAGCTCCACGGT 31614
Query 63940 TGTTACACCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATG 63999
|| || || | || | || || || |||||||| | || | ||||| | |
Sbjct 31613 GGTGACGCCGCTGTACAAACCCTGAATCACCTTCATCGTAATCTGGGCTGGATCCACAAA 31554
Query 64000 ATCAGTGTTTAAGCCATAACATAATTTTCTAATACGAGATGTGATTTTATCAAACATGAC 64059
|||| ||| | || || || | || || || || ||||||||||| ||||||||
Sbjct 31553 GTCAGAGTTCAGCCCGTAGCACAGCTTCTGGATGCGGGAGGTGATTTTATCGAACATGAC 31494
Score = 89.7 bits (98), Expect = 7e-13
Identities = 121/169 (72%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 61917 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 61976
|||| ||||| || ||||| || || |||||| || |||| || || || ||||| |
Sbjct 33720 TCCAGCCGTAGAAGTGCATGCTGGTCAGTTTGCCGTAGTTCGGCTCCGCAATGTGGATGT 33661
Query 61977 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCT 62036
||| || || || || ||||||||||| || | ||| || ||||| || | | ||||
Sbjct 33660 TCAGGGACTGGCTCTGGTCGATGAAGGCGCCACGGTCGGCTGCCATCTTGAGCACGGTCT 33601
Query 62037 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGG 62085
| || | || ||||| | |||||||| | |||| | ||| |||||
Sbjct 33600 TCTGGGAGATCTCCCACACGGTTTTATACAGCTGCTTCAGATCGTCTGG 33552
>seq30
Length=3550406
Score = 93.3 bits (102), Expect = 5e-14
Identities = 120/166 (72%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 63810 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 63869
|||| || | ||| || || |||||||| || || || ||||| |||| || || || |
Sbjct 771459 CACTGAACACTTTCTTGGTCTCTTTGTGCAGGTTAGACACGGCGATTCGTGCAGCGAGGA 771400
Query 63870 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 63929
|| || || ||||||| || || |||||| || | || ||||||||||||||||
Sbjct 771399 GTGCGTAGTCGGGATGTTTGGTGGTTAGAGTGGCGGCGGTCTCTGCTGCCAGAGTGTCCA 771340
Query 63930 ATTCTACCGTTGTTACACCATTATATATTCCTTGGATAACCTTCAT 63975
|| ||||| || || ||| | || | || ||||| || |||||
Sbjct 771339 GCTCCACCGTGGTGACTCCACTGTACAGACCCTGGATCACTTTCAT 771294
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633582149002400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |