Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq331 116 3e-21 >seq331 Length=323222 Score = 116 bits (128), Expect = 3e-21 Identities = 156/216 (72%), Gaps = 1/216 (0%) Strand=Plus/Minus Query 22201 TTTTATACATTTGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACT 22260 ||||| ||| || ||| ||||| || ||||| || || | ||||| || || |||| Sbjct 7945 TTTTA-ACAGGTGCAAACATGCAGATCTTTGTGAAGACCCTCACCGGCAAGACCATCACC 7887 Query 22261 CTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAG 22320 ||||| || || ||| || ||| | || | |||| || || || || ||||| Sbjct 7886 CTTGAGGTCGAGCCCAGTGACACCATTGAGAACGTCAAGGCCAAGATCCAGGATAAGGAA 7827 Query 22321 GGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGC 22380 || ||||| ||||| || || | || || ||||||||||| ||| | || ||| |||| Sbjct 7826 GGCATTCCCCCCGACCAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGC 7767 Query 22381 ACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 ||| ||||||| |||||||| || || || |||||| Sbjct 7766 ACCCTCTCCGACTACAACATCCAGAAGGAGTCCACC 7731 Score = 111 bits (122), Expect = 1e-19 Identities = 135/184 (73%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 22214 TAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAA 22273 |||| ||||| |||||||| || || | || || || || |||| ||||| || || Sbjct 13112 TAAACATGCAGATTTTTGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTCGAGC 13053 Query 22274 CCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCG 22333 ||| ||| ||| | || || | || |||||||| |||||||| || ||||| || | Sbjct 13052 CCAGCGACACCATTGAGAATGTGAAGGCTAAAATTCAGGACAAGGAAGGCATTCCCCCTG 12993 Query 22334 ATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATT 22393 | || || | || || ||||||||||| ||| | || ||| ||||||| ||||||| | Sbjct 12992 ACCAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACT 12933 Query 22394 ACAA 22397 |||| Sbjct 12932 ACAA 12929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419695803452110