Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17]
6,294 sequences; 619,300,777 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq67 459 5e-124
seq30 104 4e-17
seq508 87.8 3e-12
seq134 87.8 3e-12
>seq67
Length=1635559
Score = 459 bits (508), Expect = 5e-124
Identities = 1074/1603 (67%), Gaps = 62/1603 (4%)
Strand=Plus/Minus
Query 244010 GAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCC 244069
|| || |||| | | ||||||| | | ||| | ||||||||||| ||| | ||||
Sbjct 33451 GATCCGTTGTTGCCAATGAGCTTGTTCTTCATCTCCTCGTTCCACAGCCCC---CTCTCC 33395
Query 244070 ---AGCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGC 244126
|| | | || ||| || ||||| | |||||||||||| || || || | |||
Sbjct 33394 GTCAGGTCTTTGAGCAGATGAGGATTCACGATCTGAAACTCTCCAGAGAGGACCCTGCGG 33335
Query 244127 TGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTG 244186
||||| ||||||| || | ||||| ||| |||||||||| ||||| || |||
Sbjct 33334 GTGTAGATGTTGCTGGTGTAGGCTTCGATAGACTCGTTGTTGCCCAGGATCTGTGCTGTG 33275
Query 244187 CTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGG 244246
|| || ||||| || | || ||| || ||||||||||||||||| | |||
Sbjct 33274 GAGGCCGTGGGCATCGGGGCCAGCAGTAGGCTGTTCCTCACGCCGTGTTTGGCGATCTTT 33215
Query 244247 AGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATG 244306
| ||| ||||||||| ||| || ||| || || ||||||||
Sbjct 33214 TCCTTCAGCAGCTTCCAGTCCAACA-----GATCGGTGGGCGTCTTCT----CCCACATG 33164
Query 244307 TCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCG 244366
|| |||| || | |||||||||||| || ||| ||||| ||| |||||| ||| |
Sbjct 33163 TCGTACTGGAGGATCCCCTTGCTGACCGGAGAGCCTTCGTACGTCTCGTAGGGGCCGA-G 33105
Query 244367 CGCTG-GGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCAT 244425
| | | |||||||| |||||| | || ||||||||||||||||||||||| |||||
Sbjct 33104 CTCAGCGGCCAGCTCGCAGCTCGCCTCCAGGGCGGCGTAGTAGATGGTCTCAAAGATTTG 33045
Query 244426 CTTGTTCATGTCGCGG-GCCTTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGT 244484
|||||| | || | |||| | || || ||| | ||||| |||||| | |
Sbjct 33044 GATGTTCA-GCAGCTGCGCCTCGGGGCTTTCAAACGGGTAACGCATCAGGATGAAGGCAT 32986
Query 244485 CGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTT 244544
| |||| || || |||||||| || || || ||||| ||||||||||| | ||||
Sbjct 32985 CCGCCAAACCTTGAACGCCGATTCCTATTGGCCTGTGACGCTTGTTGGACTTCTCCGCTT 32926
Query 244545 CGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGA 244604
||||||| || || ||||| ||||| | |||||| | ||| | ||| |||
Sbjct 32925 CGGGCACTGGATAGAAGTTAATCTCGATGATCTTGTTCAAGTTTC---TGACAATG---- 32873
Query 244605 CGACGTCGGCCAGCAGCTGAAAGTCGT----ACTCGTAGGGATCCTCGGCGATGGTGATC 244660
|| | || || ||| || ||| | | || | | ||| | | ||
Sbjct 32872 --ACTTTGGTCA-CAGATGCTAGTTTTTTAAAGTCAAAAGTCCGCTCAGGGGTG------ 32822
Query 244661 CTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTG 244720
|| || |||||| || | | |||||| || ||||| || ||||| || | ||
Sbjct 32821 ---ACGTACATGTTGAGCGCAATGGAGGCCAGATTACAGACCGCTACCTCATCGTCGCTG 32765
Query 244721 GTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGA 244780
||||| | || || || ||||||||||| |||| ||||| |||||||| | ||| ||
Sbjct 32764 GTGTATTCAACGATTTCTGTGCAGAGGTTGCTGCTTTTGATTGTGCCCAGATTCTGCTGG 32705
Query 244781 TTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGG 244840
||| ||| |||||||||||| ||||| |||||| | ||| ||||| || ||||
Sbjct 32704 TTGCTCTTTCGGTTGCAGGCGTCTTTGTACAGCATGTACGGCGTACCGGTTTCTGTCTGG 32645
Query 244841 GCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAG-CCTTGCCCTC 244899
| | | || | || ||| | | | |||||| ||| | || | || | |||||
Sbjct 32644 GACTCAATGATGGCGTGCCACACCTGCTGAGCCTTCACC-ACACGCTTGACCCTCCCCTC 32586
Query 244900 TGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGG 244959
||| || ||||| || ||| ||||| ||||| |||||| || |||||
Sbjct 32585 CTTCTCATATGAAGTGTAGAGCTTCTCAAACTCCTCACCCCAACACTCGTCCAGCCCGGG 32526
Query 244960 GCACGACGCCGGGCACATGAGACTCCACTC---GCCGCCGTCCTTGACCCTCTGCATGAA 245016
||| || ||||| ||| ||| || | || ||| || |||| ||||||
Sbjct 32525 ACACTCATTGGGACACATCAGAGACCAGTCTTGGTTGCTTTCC---ACTCTCTTCATGAA 32469
Query 245017 GAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGT 245076
| ||| |||||||| ||||| | ||| ||||| |||| ||||||||| ||| || ||
Sbjct 32468 CAAGTCAGGGATCCACAGGGCGTAGAAAAGGTCTCTGGCCCTCTGCTCCTCCTTTCCTGT 32409
Query 245077 GTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGC 245136
||||||| ||||||||| |||||||| || |||| |||||| ||||||| ||| | ||
Sbjct 32408 GTTCTTCTTCAGCTCCAGGAAGTCAAACACATCGAAGTGCCACGGCTCCAGGTACATGGC 32349
Query 245137 GAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCGCGTTGAAGAT 245196
|| ||| ||||| | |||||||| |||||||| || | | | |||| | |
Sbjct 32348 GAAGGCTCCGGGTCTTTTGTTGCCGCCCTGGTCGACATAACGCGCCGTGTTGTTGTAAAC 32289
Query 245197 GCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCT- 245255
| ||| | || |||| ||||| |||| |||||| ||||| ||||| || ||||
Sbjct 32288 TCTCAGCATGGGGACTAACCCGTTTGAGTTGCCGTTTGTGCCGGCAATGTA-GCTCCCTG 32230
Query 245256 TGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGC 245315
| |||| | ||||| | || || | ||| || || ||| ||||||||||| |
Sbjct 32229 TTGATCTGATGCAGCTGACAGCCACACCGATTCCTCCAGCCGACTTTGAGATGAGGGCAC 32170
Query 245316 AGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGC 245375
| ||| | ||||| ||||| || |||||||| ||||||| |||||| ||||
Sbjct 32169 ACTGCTTCAGAGTGTCGTAGATGCCTTCGATGCTGTCGTCCTTCATGGCGAGCAGGAAGC 32110
Query 245376 AGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAA 245435
|| ||||||||| ||| || | | | | ||||| ||||| || ||||||||| |
Sbjct 32109 AGCTGGACAGCTGAGGCCTGTTGGTACCGGCATTGAAGAGAGTAGGCGAGGCGTGGGTGA 32050
Query 245436 AGTAGCGGCT-CGAGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTCGCCGTGG 245494
| | | || ||| || | ||| |||| | |||||||||| | ||||
Sbjct 32049 ACCA-CTTCTCCGACAGCAGGTTGTAGGTCTCAATGGCTGCGTCGATGTCCGTTCTGTGG 31991
Query 245495 ATCTGCAGGGCGCACCTCATGAGGGTGTGCTGGGGCGTCTCGATGGGTCCCT----CGGG 245550
|| | | ||||||||| |||||||||| ||| | || | || ||
Sbjct 31990 ATGCCAACAGAAACCCTCATGAGCATGTGCTGGGG----TCGTTCGGCCACTTTGCCGTT 31935
Query 245551 TCCCTTGAGCATGTAGGAGCGCTCGAGCGTCTTGAACCCAAAG 245593
||| |||| |||||| ||||| || |||||||| ||||||
Sbjct 31934 GATCTTCAGCAGGTAGGACCGCTCCAGAGTCTTGAAGCCAAAG 31892
>seq30
Length=3550406
Score = 104 bits (114), Expect = 4e-17
Identities = 107/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 244097 ACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATG 244156
|||||||||||||| || ||||| | ||| ||||| ||||||| || | ||| |||
Sbjct 774301 ACCTGAAACTCTCCTGAGAGCACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCCTCAATG 774242
Query 244157 CTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGA 244216
||| |||||||||| ||||| || ||| || || |||||||| | || |||||
Sbjct 774241 GACTCGTTGTTGCCCAGGATCTGGGCAGTGGAAGCTGTGGGCATGGGGGCCAAGAGCAGG 774182
Query 244217 CTGTTCCTCACGCCGTGCCT 244236
||||||||||| || |||||
Sbjct 774181 CTGTTCCTCACACCATGCCT 774162
Score = 93.3 bits (102), Expect = 8e-14
Identities = 78/96 (81%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 244721 GTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGA 244780
||||||| || ||||| ||||| ||||| ||| | |||||||||||||||| ||| ||
Sbjct 773353 GTGTACTCTACGATCTCTGTGCACAGGTTGCTGGATTTGATGGTGCCCAGGTTCTGCTGG 773294
Query 244781 TTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATG 244816
||| ||| | |||||||| |||||||| ||||||
Sbjct 773293 TTGCTCTTCCCATTGCAGGCATCCTTGTAAAGCATG 773258
Score = 93.3 bits (102), Expect = 8e-14
Identities = 156/220 (71%), Gaps = 8/220 (4%)
Strand=Plus/Minus
Query 244318 CAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCG---TCGCGCTGGGC 244374
|| ||||||||||||||| ||| ||||||| ||| || ||| || |||| ||
Sbjct 773911 CACCCCCTTGCTGACGGGAGAGCCGGCGTAGGTTTCGTAAGGGCCGAGCTC-CGCT--GC 773855
Query 244375 CAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCAT 244434
||||| |||||| | || |||||||||| ||||| ||||| |||||| |||| |
Sbjct 773854 CAGCTCACAGCTGGCCTCCAGGGCGGCGTGATAGATAGTCTCAAAGATCTGAATGTTGA- 773796
Query 244435 GTCGCGGGCCTTGCCGCAGGTGAAGGGGAT-GCCCATCATCATGAAGACGTCGGCCAGTC 244493
| || || ||| | | || |||| | ||||| |||||| | || ||||| |
Sbjct 773795 GCAGCTGGGCTTCTTGGCTTTCAAATGGATAACGCATCAGGATGAAGGCATCAGCCAGAC 773736
Query 244494 CCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGA 244533
|||| || ||||| || || || ||||| ||| |||| ||
Sbjct 773735 CCTGGACACCGATTCCAATCGGCCTGTGGCGCATGTTTGA 773696
>seq508
Length=211378
Score = 87.8 bits (96), Expect = 3e-12
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755
|| ||||| | || || || | || || ||||| ||||||||||| ||| | |||||
Sbjct 169500 GGGGAGAGAATCGTGGCTTTCGCAGCAGTGGAGGGTATCTTCTTCTCAGGCTCATTCGCT 169559
Query 42756 TCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTC 42815
|||||| ||||||||| ||| | | ||||| || || |||||||| || || ||
Sbjct 169560 GCCATCTATTGGCTCAAGAAGAGAGGGCTAATGCCTGGTCTTACCTTCTCCAATGAGCTG 169619
Query 42816 ATCAGCAGGGACGAGG 42831
|| |||||||| ||||
Sbjct 169620 ATTAGCAGGGATGAGG 169635
>seq134
Length=707179
Score = 87.8 bits (96), Expect = 3e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 43070 CCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCG 43129
||| |||||||| ||||||||||| || ||||||| ||||||||||| || ||||||||
Sbjct 318804 CCCGTTCGACTTCATGGAGAACATTTCTCTGGAGGGAAAGACCAACTTCTTTGAGAAGCG 318863
Query 43130 CGTCGCCGACTACCAG 43145
|||| ||| ||||||
Sbjct 318864 GGTCGGCGAGTACCAG 318879
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944264904113440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |