Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq402 86.0 5e-12 seq192 86.0 5e-12 >seq402 Length=267106 Score = 86.0 bits (94), Expect = 5e-12 Identities = 74/88 (84%), Gaps = 3/88 (3%) Strand=Plus/Plus Query 114331 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAA-GATCTAAGG 114387 || |||||||| ||||||||||| |||| |||||||||||||| | | |||| |||| Sbjct 85390 TGGCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGTTGAAGCGATCAAAGG 85449 Query 114388 AACCAAAACTGATATATTGAGCCATTCG 114415 ||||| ||||||| || ||||||||||| Sbjct 85450 AACCATAACTGATTTAATGAGCCATTCG 85477 Score = 86.0 bits (94), Expect = 5e-12 Identities = 74/88 (84%), Gaps = 3/88 (3%) Strand=Plus/Plus Query 115528 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAA-GATCTAAGG 115584 || |||||||| ||||||||||| |||| |||||||||||||| | | |||| |||| Sbjct 85390 TGGCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGTTGAAGCGATCAAAGG 85449 Query 115585 AACCAAAACTGATATATTGAGCCATTCG 115612 ||||| ||||||| || ||||||||||| Sbjct 85450 AACCATAACTGATTTAATGAGCCATTCG 85477 >seq192 Length=519184 Score = 86.0 bits (94), Expect = 5e-12 Identities = 74/88 (84%), Gaps = 3/88 (3%) Strand=Plus/Plus Query 114331 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAA-GATCTAAGG 114387 || |||||||| ||||||||||| |||| |||||||||||||| | | |||| |||| Sbjct 470161 TGGCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGTTGGAGCGATCAAAGG 470220 Query 114388 AACCAAAACTGATATATTGAGCCATTCG 114415 ||||| ||||||| || ||||||||||| Sbjct 470221 AACCATAACTGATTTAATGAGCCATTCG 470248 Score = 86.0 bits (94), Expect = 5e-12 Identities = 74/88 (84%), Gaps = 3/88 (3%) Strand=Plus/Plus Query 115528 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAA-GATCTAAGG 115584 || |||||||| ||||||||||| |||| |||||||||||||| | | |||| |||| Sbjct 470161 TGGCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGTTGGAGCGATCAAAGG 470220 Query 115585 AACCAAAACTGATATATTGAGCCATTCG 115612 ||||| ||||||| || ||||||||||| Sbjct 470221 AACCATAACTGATTTAATGAGCCATTCG 470248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397031942087788