Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq67 192 7e-44 seq30 95.1 1e-14 >seq67 Length=1635559 Score = 192 bits (212), Expect = 7e-44 Identities = 938/1464 (64%), Gaps = 50/1464 (3%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| ||| | ||||| | || | |||| ||||| |||| ||| || || |||||| Sbjct 33331 TAGATGTTGCTGGTGTAGGCTTCGATAGACTCGTTGTTGCCCAGGATCTGTGCTGTGGAG 33272 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061 || |||||||| || |||| || |||||||| | | || | || || |||| Sbjct 33271 GCCGTGGGCATCGGGGCCAGCAGTAGGCTGTTCCTCACGCCGTGTTTGGCGATCTTTTCC 33212 Query 114062 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGT-CTCCCCCTGCCACATATCAAACTGGAG 114120 || || | |||||| | || | || | | || |||||| || ||||||| Sbjct 33211 TTCAGCAGCTTCCAGTCCAACA-GATCGGTGGGCGTCTTCTCCCACATGTCGTACTGGAG 33153 Query 114121 GATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCC---CTCAACCTCCGC 114177 ||| || | | | | || || || || | |||||||| ||||| |||| | || Sbjct 33152 GATCCCCTTGCTGACCGGAGAGCCTTCGTACGTCTCGTAGGGGCCGAGCTCAGCG---GC 33096 Query 114178 CAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT 114237 || ||| |||||||||| ||||| |||| || || |||||||| || | |||| Sbjct 33095 CAGCTCGCAGCTCGCCTCCAGGGCGGCGTAGTAGATGGTCTCAAAGATTTGGATGTTCAG 33036 Query 114238 TGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACC 114297 || |||||| | ||||||| | || || || || ||||||| | ||| Sbjct 33035 CAGCTGCGCCTCGGGGCTTTCAAACGGGTAACGCATCAGGATGAAGGCATCCGCCAAACC 32976 Query 114298 TTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTT-TCGAGCGGTCTC---CA 114353 ||| || |||| || ||||| | || | | | || ||||| || || | || || Sbjct 32975 TTGAACGCCGATTCCTATTGGCCTGTGACGCTTGTTGGACTTCTC---CGCT-TCGGGCA 32920 Query 114354 CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTT 114413 | ||||| || || | ||||| | | | || | ||| || | || || || | Sbjct 32919 CTGGATAGAAGTTAATCTCGATGATCTTGTTCAAGTTTCTGACAATGACTTTGGTCA--- 32863 Query 114414 CATGAAGCT--TTTCGTAA--TCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGG 114469 || || ||| ||| ||| |||||| | || ||| |||| ||| | || Sbjct 32862 CA-GATGCTAGTTTTTTAAAGTCAAAAGTCCG---CTCAGGGGTGACGTACATGTTGAGC 32807 Query 114470 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 114529 || || || ||||||||||| || | |||||| | ||||| || | ||||| Sbjct 32806 GCAATGGAGGCCAGATTACAGACCGCTACCTCATCGTCGCTGGTGTATTCAACGATTTCT 32747 Query 114530 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 114589 || || | || || || || ||||||| |||| || || |||| ||| || Sbjct 32746 GTGCAGAGGTTGCTGCTTTTGATTGTGCCCAGATTCTGCTGGTTGCTCTTTCGGTTGCAG 32687 Query 114590 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 114649 || || ||||| |||||||| ||||| || || || || ||||||| | || || | | Sbjct 32686 GCGTCTTTGTACAGCATGTACGGCGTACCGGTTTCTGTCTGGGACTCAATGATGGCGTGC 32627 Query 114650 CAGACAT-CGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTA 114708 || || | | | | || || || ||| | | |||||||| ||| || ||||| Sbjct 32626 CACACCTGCTGAGCCTTCACCACACGC-TTGACCCTCCCCTCCTTCTCATATGAAGTGTA 32568 Query 114709 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 114768 ||| |||||||| |||||| ||| ||||| || || || || || | Sbjct 32567 GAGCTTCTCAAACTCCTCACCCCAACACTCGTCCAGCCCGGGACACTCATTGGGACACAT 32508 Query 114769 GAGAGACCA---TTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAG 114825 |||||||| ||| | ||| || | ||||||||| | ||| |||||||| || Sbjct 32507 CAGAGACCAGTCTTGGTTGCTTTCC---ACTCTCTTCATGAACAAGTCAGGGATCCACAG 32451 Query 114826 AGCTGAGAAGAGATCCC-GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCA 114884 || |||| || || | | | ||| || | | || || || || ||||| Sbjct 32450 GGCGTAGAAAAGGTCTCTGGCCCTCTGCTCCTCCTTTCCTGTG-TTCTTCTTCAGCTCCA 32392 Query 114885 AAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC----CTTA 114940 ||||| | | ||| ||||||||| |||||||||| |||| | || ||| Sbjct 32391 GGAAGTCAAACACATCGAAGTGCCACGGCTCCAGGTACATGGCGAAGGCTCCGGGTCTTT 32332 Query 114941 CGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATG 115000 | | || |||||| ||||| | ||| ||| || | || | ||||| || | Sbjct 32331 TGTTG-CCGCCCTGGTCGACATAACGCGCCGTGTTGTTGTAAACTCTCAGCATGGGGACT 32273 Query 115001 ATACCATCAGATTGGCCATTTGTCCCCCGAATAC-GAGACTTATTGGCTCTGA--CATCA 115057 | || | || | ||| ||||| || ||| | | | ||| ||||| || | Sbjct 32272 AACCCGTTTGAGTTGCCGTTTGTGCCGGCAATGTAGCTCCCTGTTGA-TCTGATGCAGCT 32214 Query 115058 TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTG 115117 || || ||| || || || ||| |||||||||| | || |||| | | ||| || Sbjct 32213 --GACAGCCACACCGATTCCTCCAGCCGACTTTGAGATGAGGGCACACTGCTTCAGAGTG 32156 Query 115118 CCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGT 115177 ||||||| || ||||| ||| |||| | |||| ||||||||||| |||| || Sbjct 32155 TCGTAGATGCCTTCGATGCTGTCGTCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGA 32096 Query 115178 GGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGA 115236 ||||| ||||| || |||||||| || || | |||||| ||||| || | | || Sbjct 32095 GGCCTGTTGGTACCGGCATTGAAGAGAGTAGGCGAGGCGTGGGTGAAC-CACTTCTCCGA 32037 Query 115237 CATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGAC 115296 || | | ||||||||| | | | ||| ||||| | ||| || || | || || Sbjct 32036 CAGCAGGTTGTAGGTCTCAATGGCTGCGTCGATGTCCGTTCTGTGGATGCCAACAGAAAC 31977 Query 115297 CCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACT 115356 || ||| | ||||| |||||| ||| || | || | || | || | ||||| Sbjct 31976 CCTCATGAGCATGTGCTGGGGTCGTTCGGCCACTTTGCCGTTGATCTTCAGCAGGTAGGA 31917 Query 115357 CTTCTCCAAGGTCTTGAGACCAAA 115380 | ||||| ||||||| ||||| Sbjct 31916 CCGCTCCAGAGTCTTGAAGCCAAA 31893 >seq30 Length=3550406 Score = 95.1 bits (104), Expect = 1e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| ||| | ||||| | ||||| | |||| ||||| |||| ||| ||||| ||||| Sbjct 774268 TAGATGTTGCTGGTGTAGGCCTCAATGGACTCGTTGTTGCCCAGGATCTGGGCAGTGGAA 774209 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 114033 |||||||||||||| |||| ||| |||||||| Sbjct 774208 GCTGTGGGCATGGGGGCCAAGAGCAGGCTGTT 774177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597306603205520