Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_012743.2 Length=62715 Score E Sequences producing significant alignments: (Bits) Value seq120 116 1e-21 >seq120 Length=812315 Score = 116 bits (128), Expect = 1e-21 Identities = 210/303 (69%), Gaps = 7/303 (2%) Strand=Plus/Plus Query 9119 CGTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAACCCGCTACCTCCC 9178 |||||||||||| || ||||||||||| ||||| |||||||||| ||||||| ||| Sbjct 48167 CGTCAACAAAGTGATTCTCGTCGGCAACGCCGGCGGCGACCCGGAAGTCCGCTACACCCC 48226 Query 9179 GAGCGGCGACGCAATCTCCAATATCCGTCTCGCGACGACCGATCGCTACAAGGACAAGGC 9238 || |||| |||| | | || || || || || | ||| ||| || || ||| Sbjct 48227 GAACGGCAACGCCGTAACGAACATAACCCTGGCCACCAGCGAAAGCTGGAAAGATAAGCA 48286 Query 9239 GAGCGGCGAGTTCAAGGAAGTGACCGAGTGGCACCGCGTCGCTTTCTTCGGCCGCCTCGC 9298 || |||| || |||| ||||||||||||||||| | ||||||||| |||| Sbjct 48287 GACCGGCCAGCAGCAGGAGCGTACCGAGTGGCACCGCGTAGTGTTCTTCGGCAAGATCGC 48346 Query 9299 CGAGATCGTCGACGAGCACCTTCG-CAAGGGCGCATCGGT-CTACATCGAGGGGCGCATC 9356 ||| |||| | ||| | || || ||||| || | || |||| |||| || || Sbjct 48347 CGAAATCGCGGGTGAGTATCTGCGAAAAGGGAGC--CAGTGCTACGTCGAAGGCACTCTC 48404 Query 9357 AAGACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGCTACACGACCGAGATCGTCGCC 9416 || || |||| ||| || ||| | | |||||||| ||||||||||||| | Sbjct 48405 CGCACCCGCGAGTG---GGAAAAAGACGGAGTGAAACGCTACACCACCGAGATCGTCGTC 48461 Query 9417 GAC 9419 ||| Sbjct 48462 GAC 48464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200547815172984