Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17]
6,294 sequences; 619,300,777 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq67 185 1e-41
seq30 98.7 2e-15
>seq67
Length=1635559
Score = 185 bits (204), Expect = 1e-41
Identities = 583/892 (65%), Gaps = 16/892 (2%)
Strand=Plus/Minus
Query 204884 TCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGAC 204943
|| ||||| || ||||| | ||| | || || | |||| || ||||||||| |
Sbjct 32758 TCAACGATTTCTGTGCAGAGGTTGCTGCTTTTGATTGTGCCCAGATTCTGCTGGTTGCTC 32699
Query 204944 TTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGATCGC 205003
|| ||||| |||| ||| ||||||| |||| ||||| | ||| | || |||| || |
Sbjct 32698 TTTCGGTTGCAGGCGTCTTTGTACAGCATGTACGGCGTACCGGTTTCTGTCTGGGA---C 32642
Query 205004 AGAATG-TGG-GT-CCACAATTCGCGAGCCT---CCACTTGCTTCACGTACATCCCTTGA 205057
|||| ||| || ||||| | |||||| |||| |||| || | |||| |
Sbjct 32641 TCAATGATGGCGTGCCACACCTGCTGAGCCTTCACCACACGCTTGAC---CCTCCCCTCC 32585
Query 205058 GACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTA-CACGTCCATCAGCCCTGG 205116
||| ||| ||||| ||| | |||| || ||| | ||| || |||||| ||
Sbjct 32584 TTCTCATATGAAGTGTAGAGCTTCTCAAACTCCTCACCCCAACAC-TCGTCCAGCCCGGG 32526
Query 205117 ACATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTCACCCTCTCCATAAACAG 205176
||| | |||||||||||||||||||| || | | || ||| |||| ||| ||||
Sbjct 32525 ACACTCATTGGGACACATCAGAGACCAGTCTTGGTTGCTTTCCACTCTCTTCATGAACAA 32466
Query 205177 GTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTT 205236
||| |||||||||| |||| || || || | |||||| | || | ||| |||
Sbjct 32465 GTCAGGGATCCACAGGGCGTAGAAAAGGTCTCTGGCCCTCTGCTCCTCCTTTCCTGTGTT 32406
Query 205237 CTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCCA 205295
||| |||| ||||| ||| | | | ||| |||||||||||| | ||| ||| |
Sbjct 32405 CTTCTTCAGCTCCAG-GAAGTCAAACACATCGAAGTGCCACGGCTCCAGGTACATGGCGA 32347
Query 205296 TTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTC 205355
|| || || || ||||| || |||||||| || || | | | |||| ||||||
Sbjct 32346 AGGCTCCGGGTCTTTTGTTGCCGCCCTGGTCGACATAACGCGCCGTGTTGTTGTAAACTC 32287
Query 205356 GCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTCAG 205415
|||||| || || | ||||| | | | ||||| |||| | ||| ||| |
Sbjct 32286 TCAGCATGGGGACTAACCCGTTTGAGTTGCCGTTTGTGCCGGCAATGTAGCTCCCTGTTG 32227
Query 205416 CCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGCACT 205475
|| | | | || ||| | || || || |||| |||| | ||| |||| ||||
Sbjct 32226 ATCTGATGCAGCTGACAGCCACACCGATTCCTCCAGCCGACTTTGAGATGAGGGCACACT 32167
Query 205476 CTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCACCAGATAGCACG 205535
| ||||||| |||||||||| ||||| |||||| || | | ||| ||||
Sbjct 32166 GCTTCAGAGTGTCGTAGATGCCTTCGATGCTGTCGTCCTTCATGGCGAGCAGGAAGCAGC 32107
Query 205536 AAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCTGGCGTGGCTGAAGC 205595
| ||||| | |||||| || || | |||||| || || ||||||| |||| |
Sbjct 32106 TGGACAGCTGAGGCCTGTTGGTACCGGCATTGAAGAGAGTAGGCGAGGCGTGGGTGAACC 32047
Query 205596 GCTTCTCGCTCAAACACCTGTAGGTCTCCAGCACGCTCTCCAGATCGAAGCCGTGAATAC 205655
|||||| || |||||||||| | | || | || | ||| || |
Sbjct 32046 ACTTCTCCGACAGCAGGTTGTAGGTCTCAATGGCTGCGTCGATGTCCGTTCTGTGGATGC 31987
Query 205656 CTATGGCGATCCTCATGAAGAGGTGTTGAGGTCTCTCCATCACCCTCTCGTTCACCTTGA 205715
| | | | |||||||| | ||| || |||| || ||| | |||| | ||| |
Sbjct 31986 CAACAGAAACCCTCATGAGCATGTGCTGGGGTCGTTCGGCCACTTTGCCGTTGATCTTCA 31927
Query 205716 GCAGATAGGCTCTCTCTAGGGTGCGGATGGCAAAAAAGTTGAAGGTGTAGTC 205767
|||| |||| | ||| || || || | |||| |||||| ||| | ||||
Sbjct 31926 GCAGGTAGGACCGCTCCAGAGTCTTGAAGCCAAAGAAGTTGTAGGAGAAGTC 31875
Score = 156 bits (172), Expect = 7e-33
Identities = 346/513 (67%), Gaps = 7/513 (1%)
Strand=Plus/Minus
Query 204100 CCTGA-TCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCA 204158
||||| | || ||||||| | | || || | || || ||||||| ||||| |||
Sbjct 33459 CCTGAATGGATCCGTTGTTGCCAATGAGCTTGTTCTTCATCTCCTCGTTCCACAGCCCCC 33400
Query 204159 ACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCC 204218
| |||| || | ||| || || || | ||||||||| ||||| || || ||||
Sbjct 33399 TCTCCGTCAGGTCTTTGAGCAGATGAGGATTCACGATCTGAAACTCTCCAGAGAGGACCC 33340
Query 204219 CTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAG 204278
|||||| | | |||| ||||| | | ||||| | |||||||||||| | ||||| |
Sbjct 33339 TGCGGGTGTAGATGTTGCTGGTGTAGGCTTCGATAGACTCGTTGTTGCCCAGGATCTGTG 33280
Query 204279 CGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGA 204338
| ||| |||||||||||| || ||||| || ||| ||| | ||| |||| ||| ||
Sbjct 33279 CTGTGGAGGCCGTGGGCATCGGGGCCAGCAGTAGGCTGTTCCTCACGCCGTGTTTGGCGA 33220
Query 204339 CCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCACTGGGTTTCACGCCCCACATGTCGA 204398
| | |||||| ||||||| || | |||| || |||||||||||
Sbjct 33219 TCTTTTCCTTCAGCAGCTTCCAGTCCAACAGATCGGTGGGCGTCTTCTCCCACATGTCGT 33160
Query 204399 ACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTGTACGTCGGATA-AGGCTGATCCTCT 204457
|||| | ||| || | ||||| || ||| | ||||||| || ||| || |||
Sbjct 33159 ACTGGAGGATCCCCTTGCTGACCGGAGAGCCTTCGTACGTCTCGTAGGGGCCGA-GCTCA 33101
Query 204458 TCTGCCAGCTTGCACGAGGCGGCCATGGCGTGATAGTACATGGTCTCAAAGATCTGAACG 204517
| ||||||| ||| || ||| |||| ||||| |||||||||||||| || | |
Sbjct 33100 GCGGCCAGCTCGCAGCTCGCCTCCAGGGCGGCGTAGTAGATGGTCTCAAAGATTTGGATG 33041
Query 204518 TTTA--ATCTGGCGGCCTCCGTTCCGTCAAACGCCAGACCCAGCATGGCAAACACGTCCG 204575
|| | | ||| ||||| | | ||||||| || || || | || | ||||
Sbjct 33040 TTCAGCAGCTG--CGCCTCGGGGCTTTCAAACGGGTAACGCATCAGGATGAAGGCATCCG 32983
Query 204576 CCAAGCCCTGCACTCCGATTCCCAACGGTCTGT 204608
|||| || || || |||||||| | || ||||
Sbjct 32982 CCAAACCTTGAACGCCGATTCCTATTGGCCTGT 32950
Score = 114 bits (126), Expect = 2e-20
Identities = 114/145 (79%), Gaps = 2/145 (1%)
Strand=Plus/Minus
Query 203917 CCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGTGAATGTT 203976
||| ||||| | ||||||| | |||||||| ||| || || || ||||| |||||
Sbjct 33719 CCAGCCGTAGAAGTGCATGCTGGTCAGTTTGCCGTAGTTCGGCTCCGCAATGTGGATGTT 33660
Query 203977 CAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATAATGGTCT 204035
||| |||||||| ||||||||||| |||||| || || || ||||| |||| | |||||
Sbjct 33659 CAGGGACTGGCTCTGGTCGATGAA-GGCGCCACGGTCGGCTGCCATCTTGAGCACGGTCT 33601
Query 204036 TCTGCGAAATCTCCCACACCGTCTT 204060
|||| || ||||||||||| || ||
Sbjct 33600 TCTGGGAGATCTCCCACACGGTTTT 33576
>seq30
Length=3550406
Score = 98.7 bits (108), Expect = 2e-15
Identities = 112/148 (76%), Gaps = 2/148 (1%)
Strand=Plus/Minus
Query 203914 CTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGTGAAT 203973
|| ||| || || | ||||||| | |||||||| ||| || || || ||||| ||
Sbjct 774751 CTTCCAGCCATAGAAGTGCATGCTGGTCAGTTTGCCGTAGTTCGGCTCAGCGATGTGGAT 774692
Query 203974 GTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATAATGG 204032
||| | |||||||| ||||| || | |||| || |||||||| ||||| |||| ||||
Sbjct 774691 GTTTAAGGACTGGCTCTGGTCAAT-ATAGGCACCACGATCTGCTGCCATCTTGAGGATGG 774633
Query 204033 TCTTCTGCGAAATCTCCCACACCGTCTT 204060
||||||| || || |||||||| || ||
Sbjct 774632 TCTTCTGGGAGATTTCCCACACAGTTTT 774605
Score = 96.9 bits (106), Expect = 6e-15
Identities = 103/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 204192 TGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGA 204251
||| |||||| ||||| || ||||||| |||||| | | |||| ||||| | | || |
Sbjct 774303 TGACCTGAAACTCTCCTGAGAGCACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCCTCAA 774244
Query 204252 ACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCA 204311
| |||||||||||| | ||||| || ||| || ||||||||||| |||| |||||
Sbjct 774243 TGGACTCGTTGTTGCCCAGGATCTGGGCAGTGGAAGCTGTGGGCATGGGGGCCAAGAGCA 774184
Query 204312 GGGAGTTGCGCACACC 204327
|| ||| | ||||||
Sbjct 774183 GGCTGTTCCTCACACC 774168
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795092641164640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |