Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17]
6,294 sequences; 619,300,777 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq331 132 5e-26
>seq331
Length=323222
Score = 132 bits (146), Expect = 5e-26
Identities = 150/200 (75%), Gaps = 1/200 (1%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||||| || ||||| | || || |||||||||||||| ||
Sbjct 7737 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAA 7796
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| | ||||||||||| || | || ||||| ||| |||||| ||||| |
Sbjct 7797 GATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCCTGGATCTTGGCCTTGACGTT 7856
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | | ||||| || | || || || | |||||||| ||||| || || || || ||
Sbjct 7857 CTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 7916
Query 46582 AAAGATTTGCAT-TTTGCAC 46600
|||||| ||||| |||||||
Sbjct 7917 AAAGATCTGCATGTTTGCAC 7936
Score = 129 bits (142), Expect = 7e-25
Identities = 169/234 (72%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 46360 TTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTA 46419
||||| || || || | ||||| || || || | || |||||| ||||| || ||
Sbjct 7467 TTATTGACCGCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATA 7526
Query 46420 GTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479
|||||| || ||||| | || || ||||||||||| || || |||| | |||||||||
Sbjct 7527 GTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTC 7586
Query 46480 GGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGA 46539
|| || | || ||||| ||| |||||| ||||| || | | |||||||| |
Sbjct 7587 GGGGGGAATGCCTTCCTTATCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTGGG 7646
Query 46540 TTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || |||| |||||||| ||||| || || || || |||||||| |||||
Sbjct 7647 CTCAACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 7700
Score = 111 bits (122), Expect = 2e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 46360 TTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTA 46419
||||| || || || | ||||| || || || | || |||||| |||||||||||
Sbjct 11270 TTATTGACCGCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATATTGTA 11329
Query 46420 GTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479
|||||| || ||||| | || || || ||||||||||| || |||| | |||||||||
Sbjct 11330 GTCGGAGAGGGTGCGGCCATCTTCCAGTTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTC 11389
Query 46480 GGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGA 46539
| || | || ||||| ||| |||||| ||||| || | | ||||| || |
Sbjct 11390 AGGGGGAATGCCTTCCTTATCCTGGATCTTGGCCTTGACATTCTCAATAGTGTCACTTGG 11449
Query 46540 TTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGT 46575
|| || || | |||||||| ||||| ||||| ||
Sbjct 11450 CTCAACCTCAAGGGTGATGGTCTTGCCGGTCAGGGT 11485
Score = 98.7 bits (108), Expect = 1e-15
Identities = 131/182 (72%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 46415 TTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGC 46474
||||||||||| || ||||| | || || |||||||||||||| || |||| | ||||
Sbjct 12929 TTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGC 12988
Query 46475 TGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCG 46534
||||| | || | || ||||||||| || || ||| | || | | ||||||
Sbjct 12989 TGGTCAGGGGGAATGCCTTCCTTGTCCTGAATTTTAGCCTTCACATTCTCAATGGTGTCG 13048
Query 46535 CTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594
|| | || || || | |||||||| ||||| || || || || ||||| || |||||
Sbjct 13049 CTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAAATCTGCATG 13108
Query 46595 TT 46596
||
Sbjct 13109 TT 13110
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565193929868880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |