Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq331 145 8e-30 >seq331 Length=323222 Score = 145 bits (160), Expect = 8e-30 Identities = 173/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| ||||| || || || || || ||||| ||||| ||||||||| | || |||||| | Sbjct 7932 AAACATGCAGATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAGCC 7873 Query 38300 CACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG 38358 || |||| | | | |||| | || | || |||| || || || || |||||| ||| Sbjct 7872 CAGTGACACCATTGAGAACG-TCAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCCG 7814 Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418 |||| ||| |||| || | || ||||| |||||||| || | ||||||||| ||||| Sbjct 7813 ACCAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACT 7754 Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||||| ||||| | || || || | || |||||| |||| ||||| Sbjct 7753 ACAACATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTGAGGGGCGG 7702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500133448904960