Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17]
6,294 sequences; 619,300,777 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq5 221 9e-52
seq2 125 5e-23
seq223 111 1e-18
seq631 100 2e-15
>seq5
Length=8875486
Score = 221 bits (244), Expect = 9e-52
Identities = 942/1474 (64%), Gaps = 17/1474 (1%)
Strand=Plus/Plus
Query 517264 CACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCT 517323
|||||| ||||| ||||||||||| | || || || || || | || ||||| ||||
Sbjct 3524279 CACATTCAGAATTCCATTGGCATCAATGTCGAAGGTTACCTCCACCTGTGGGACACCTCG 3524338
Query 517324 CTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAA 517383
||||||| ||||| ||| | | ||| | || || || || || || || |
Sbjct 3524339 GGGAGCAGGAGGGATACCTGTGAGCTCAAACTTGCCGAGGAGGTTGTTGTCCTTGGTCAT 3524398
Query 517384 TTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGT 517443
|| |||||||| | | || || || | | || ||||||||||| || |
Sbjct 3524399 GGCTCTCTCACCCTCATACACCTGAATCAGCACACCTGGCTGGTTATCTGAATATGTAGA 3524458
Query 517444 AAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAA 517502
|| | ||||| | | || || || || ||||||| | || | | |||||||
Sbjct 3524459 GAAGA-TCTGGGTCTGCTTGGTGGGGATGGTGGTGTTTCGTTTGATTAAAGGTGTCATAA 3524517
Query 517503 TACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTT 517562
|||||||| || || | || ||||| ||||||| ||||| | || | | || ||
Sbjct 3524518 CTCCACCTGCAGTCTCAATGCCCAGAGACAGAGGAGCCACATCCAGCAGTAGCAAATCTT 3524577
Query 517563 GAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAA 517622
| | ||||| ||| | ||| | || ||||| || || | || |||||||| || |
Sbjct 3524578 GGACATTTTCTGAAGTGTCACCCATCAGGATAGCAGCCTGGACTGCTGCACCATAGGCCA 3524637
Query 517623 CAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT-TGAAAGA 517681
|||||||||| || || | | | || | || | | ||||| ||||| | || ||||
Sbjct 3524638 CAGCTTCATCTGGGTTGATGCTCTTGTTCAATTCTCTGCCATTAAAAAAGTCCTGCAAGA 3524697
Query 517682 AGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGT 517741
|| | | || ||||| | | || || ||||| | || |||||||| | ||
Sbjct 3524698 GCTTCTGG-ATTTTGGGAATTCTTGTGGAGCCACCAACCAGGACGATTTCATGGATCTTG 3524756
Query 517742 GATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAAC 517801
|| |||||||| || | ||| | | || ||||| || || || | || ||
Sbjct 3524757 GACTTATCCAGCTTGGCATCTTGCAGAGACTTCTCAACTGGATCCAGTGTTCCCCTGAAG 3524816
Query 517802 AAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTC 517859
| ||||| || || || || || || || || ||| | || || || || |
Sbjct 3524817 AGCTCTGAGTTGAGCTCCTCAAAGCGTGCCCTTGT--GATTGAGGTGTAGAAGTCGATAC 3524874
Query 517860 CTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAG 517919
| || |||| ||| |||| |||| ||| || || || || || | | || |
Sbjct 3524875 CCTCAAACAGAGAGTCAATCTCAAGGCTAGCCTGGGTGCTGGAGGACAGGGTCCTCTTTG 3524934
Query 517920 CACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATT--GATTCAAATCTGT 517977
| | |||||| || || | ||||| | | ||| | || ||| | | | || |
Sbjct 3524935 CTCTTTCACAAGCAGTGCGCAGTCTCCTCACTGCTCT--CTTATTTTGGCTGATGTCCTT 3524992
Query 517978 TTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTC 518037
|| | |||||| || || || || ||| | | || | || || ||||| || ||
Sbjct 3524993 CTTGTGTTTTCTTTTAAATTCCTCTACAAAGTGGTTGACCATCCGGTTGTCAAAGTCCTC 3525052
Query 518038 ACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGA 518097
|| || | | || | |||| || | | | |||| |||| || ||||||| |
Sbjct 3525053 CCCACCAAGATGTGTGTCGCCTGCAGTGGATTTCACTTCAAAAATGCCGTCTTCAATGGT 3525112
Query 518098 CAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATT-CATTTCTT 518156
|| | | || ||| ||| || ||||| | |||||| || || || || | | |
Sbjct 3525113 CAGGATGGACACGTCAAAGGTGCCTCCACCGAGATCAAAGATGAGCACGTTGCGCTCCCC 3525172
Query 518157 TGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTC 518216
| | || ||| ||| || || || || | || || || || || ||||| || || |
Sbjct 3525173 TCTTTTACCTTT-ATCCAGGCCGTAGGCGATGGCTGCTGCTGTGGGCTCATTTATGATCC 3525231
Query 518217 TCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGT 518276
||| |||||| || |||| || || || || || |||||||| || || || || |
Sbjct 3525232 TCAGAACATTCAGTCCAGAGATCACCCCAGCGTCCTTGGTGGCTTGCCTCTGGGAGTCAT 3525291
Query 518277 TAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTG 518336
||||||| || ||||| || || || || | | |||| || || | || || |
Sbjct 3525292 TAAAATAAGCTGGAACTGTGATGACTGCGTTTGACACTTTTTGTCCCAGGTAGGCTTCAG 3525351
Query 518337 CCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGG 518396
| | | ||||||||| | | ||| || || |||| ||||||| | | ||||
Sbjct 3525352 CGATCTCCTTCATTTTAACCAGGACCATGGAGGAGATTTCTTCTGGGTAGAAGGCTTTGG 3525411
Query 518397 ATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATG 518456
|| || ||| || | | | ||||| | | |||| || ||||| || |
Sbjct 3525412 TCTCCCCTTTATACTCAACCTGGACTTTGGGTTTTCCGCTATCATTGATCACTTTGAAGG 3525471
Query 518457 GCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTT 518516
||||| ||||| || || || ||| |||| |||| | ||| || || | | |
Sbjct 3525472 GCCAGAGCTTCATGTCAGACTGGACAACAGGGTCGGTAAACTTTCTCCCGATGAGCCTCT 3525531
Query 518517 TTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAA 518576
| |||||||| || || ||| || || || ||| | |||| ||||| ||||||||||
Sbjct 3525532 TGGCATCAAAGATTGTGTTGACGGGGTTCATGGCAACCTGATTCTTGGCAGCATCTCCAA 3525591
Query 518577 TCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCAT 518636
| || ||||| || ||||| | ||||| ||||| || | || || || || |
Sbjct 3525592 TGAGCCTCTCTGTGTCAGTAAAGGCCACATAGCTGGGAGTGGTTCTGTTTCCCTGGTCGT 3525651
Query 518637 TCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTA 518696
| || || || || ||||| |||| || | || || |||||| | | || || || |
Sbjct 3525652 TGGCGATGATCTCCACTTTGCCATGCTGGAAAACCCCGACACAAGAATAGGTGGTGCCCA 3525711
Query 518697 AATCAATACCAATAGCAAT---TTTATCTGACAT 518727
|||||| ||||||| || |||| |||||||
Sbjct 3525712 GATCAATGCCAATAGATATTCCTTTAGCTGACAT 3525745
>seq2
Length=11018341
Score = 125 bits (138), Expect = 5e-23
Identities = 113/142 (80%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224
||||| || || ||||| |||| || ||||||||||| ||||| || || | || |||
Sbjct 7191316 TTTTTGTCCAGGCCATAAGCAATGGCTGCAGCAGTTGGCTCATTGATGATGCGCAGCACA 7191375
Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284
||||| |||||||| |||| ||||||||||||||||| | || || || || || ||
Sbjct 7191376 TTAAGCCCAGCAATGGTTCCAGCATCTTTAGTGGCTTGACGCTGGGAGTCATTGAAGTAA 7191435
Query 518285 GCAGGAACAGTAATAACGGCAT 518306
|||||||| |||||||| ||||
Sbjct 7191436 GCAGGAACTGTAATAACTGCAT 7191457
Score = 95.1 bits (104), Expect = 9e-14
Identities = 111/150 (74%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 517249 TTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAAT 517308
||| ||| | |||| ||||| ||||| ||||||||||| | ||||| || || |||||
Sbjct 7190093 TTTGTCAACTGCAGATACATTGAGAATGCCATTGGCATCAATGTCAAAAGTCACCTCAAT 7190152
Query 517309 TTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATT 517368
|||||||| ||||| | |||||||| || || || | |||| | |||||| ||||
Sbjct 7190153 CTGAGGGACACCTCTGGGTGCAGGTGGAATACCAGTCAGCTCAAATTTGCCCAGAATATT 7190212
Query 517369 ATTATCTTTAGTGAATTTTCGTTCACCCTC 517398
||| || || || | || |||||| ||
Sbjct 7190213 ATTGTCCTTGGTCATGGCTCTTTCACCTTC 7190242
>seq223
Length=448970
Score = 111 bits (122), Expect = 1e-18
Identities = 114/149 (77%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224
||||| || || ||||| |||| ||||||||||||||||||||| || || | || |||
Sbjct 201850 TTTTTGTCGAGGCCATAAGCAATAGCAGCAGCAGTTGGTTCATTGATGATACGCAGCACA 201909
Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284
|| || |||| ||| | ||||||||||| || || || | || || || || || ||
Sbjct 201910 TTCAGCCCAGAAATGGTCCCTGCATCTTTGGTAGCCTGGCGCTGAGAGTCATTGAAGTAG 201969
Query 518285 GCAGGAACAGTAATAACGGCATCAGTTAC 518313
||||| ||||| | || |||| ||||||
Sbjct 201970 GCAGGCACAGTCACTACAGCATTAGTTAC 201998
>seq631
Length=169947
Score = 100 bits (110), Expect = 2e-15
Identities = 100/130 (77%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236
||||| |||| ||||||||||||||| ||||| || || | || ||| || || ||||
Sbjct 157153 CCATAAGCAATAGCAGCAGCAGTTGGCTCATTGATGATACGCAGAACGTTGAGGCCAGAG 157212
Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 518296
||| |||| ||||| |||||||| || | || || ||||| || || || || || |||
Sbjct 157213 ATTGTTCCAGCATCCTTAGTGGCCTGACGCTGGGAGTCGTTGAAGTAGGCGGGTACCGTA 157272
Query 518297 ATAACGGCAT 518306
|| || ||||
Sbjct 157273 ATTACAGCAT 157282
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780510070987564
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |