Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17]
6,294 sequences; 619,300,777 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq67 219 5e-52
seq508 91.5 2e-13
>seq67
Length=1635559
Score = 219 bits (242), Expect = 5e-52
Identities = 901/1397 (64%), Gaps = 38/1397 (3%)
Strand=Plus/Plus
Query 111704 GTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAG 111763
||||| |||||| | || || |||||||| || ||||| || || || |||||||
Sbjct 32048 GTTCACCCACGCCTCGCCTACTCTCTTCAATGCCGGTACCAACAGGCCTCAGCTGTCCAG 32107
Query 111764 TTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGA 111823
|| ||||| | || | ||||| || ||| | ||||| |||| |||||| | |
Sbjct 32108 CTGCTTCCTGCTCGCCATGAAGGACGACAGCATCGAAGGCATCTACGACACTCTGAAGCA 32167
Query 111824 ATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATG--TCAGA 111881
||||||| |||||||||| |||||| || ||||| || || | || |||||
Sbjct 32168 GTGTGCCCTCATCTCAAAGTCGGCTGGAGGAATCGGTGTGGCTGTCA--GCTGCATCAGA 32225
Query 111882 GCCAACAAGTCTCGT-ATTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCT 111940
| |||| | | ||| || ||||| || | ||| | || | | || |||||
Sbjct 32226 TC-AACAGGGAGCTACATTGCCGGCACAAACGGCAACTCAAACGGGTTAGTCCCCATGCT 32284
Query 111941 TCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGTCGCAAG----GGAT 111996
| || | ||| ||| ||||| ||||| |||| | || | | ||| |||
Sbjct 32285 GAGAGTTTACAACAACACGGCGCGTTATGTCGACCAGGGCGG-CAACAAAAGACCCGGAG 32343
Query 111997 CTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTC 112056
| |||| | || || ||||| |||||| ||| | | || ||||| ||| ||
Sbjct 32344 CCTTCGCCATGTACCTGGAGCCGTGGCACTTCGATGTGTTTGACTTCCTGGAGCTGAAGA 32403
Query 112057 TCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAG 112116
||| ||| | |||||| | || | | || || |||| ||| || ||||| || |
Sbjct 32404 AGAACACAGGAAAGGAGGAGCAGAGGGCCAGAGACCTTTTCTACGCCCTGTGGATCCCTG 32463
Query 112117 ATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAAT---TGGTCTCTCTTTTGTCCAGACA 112173
| | |||||||||||||| ||| || | | |||||||| | ||||| |
Sbjct 32464 ACTTGTTCATGAAGAGAGT---GGAAAGCAACCAAGACTGGTCTCTGATGTGTCCCAATG 32520
Query 112174 AGGCACCCGGTCTCTCCGA-TGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTAC 112232
|| ||||| || ||| || | ||||||||||||||| |||||||| ||
Sbjct 32521 AGTGTCCCGGGCTGGACGAGTGTTG-GGGTGAGGAGTTTGAGAAGCTCTACACTTCATAT 32579
Query 112233 GAGGAAGAAAGTCGGGCGACTGCGAC-GGTGCCAGCTGCCGATGTGTGGAAAGCTATTCT 112291
||| | || | ||| | ||| |||| ||| | |||||| | || || |
Sbjct 32580 GAGAAGGAGGGGAGGGTCAA-GCGTGTGGTGAAGGCTCAGCAGGTGTGGCACGCCATCAT 32638
Query 112292 CAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAA 112351
|||| || || || || ||||| || || ||||| |||||||||||||| |||| |||
Sbjct 32639 TGAGTCCCAGACAGAAACCGGTACGCCGTACATGCTGTACAAAGACGCCTGCAACCGAAA 32698
Query 112352 GAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGA 112411
||| || || ||||| |||| ||||| || ||||||||| ||||||||| | ||
Sbjct 32699 GAGCAACCAGCAGAATCTGGGCACAATCAAAAGCAGCAACCTCTGCACAGAAATCGTTGA 32758
Query 112412 ATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTA 112471
|| || | | |||||| || || ||||| || || || || || ||| || |||
Sbjct 32759 ATACACCAGCGACGATGAGGTAGCGGTCTGTAATCTGGCCTCCATTGCGCTCAACATGTA 32818
Query 112472 TGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAA---AC 112528
|| || ||| ||| ||||| | | ||||||| || || ||| |
Sbjct 32819 CGTCACCCCTGAG---CGGACTTTTGACTTTAAAAAACTAGCATCTGTGACCAAAGTCAT 32875
Query 112529 TGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCG 112588
|||| | |||| | |||| | || || | || || || || || ||
Sbjct 32876 TGTC---AGAAACTTGAACAAGATCATCGAGATTAACTTCTATCCAGTGCCCGAAGCGGA 32932
Query 112589 TAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATT 112648
|| || || | | | ||| | ||||| || |||| || |||||| | ||||||| ||
Sbjct 32933 GAAGTCCAACAAGCGTCACAGGCCAATAGGAATCGGCGTTCAAGGTTTGGCGGATGCCTT 32992
Query 112649 CATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATT 112708
||| || || || | ||||| | ||| ||| || | || | || ||
Sbjct 32993 CATCCTGATGCGTTACCCGTTTGAAAGCCCCGAGGCGCAGCTGCTGAACATCCAAATCTT 33052
Query 112709 TGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCC 112768
|||||| || || ||||||| || |||||||| | ||| |||| | | || ||
Sbjct 33053 TGAGACCATCTACTACGCCGCCCTGGAGGCGAGCTGCGAGCTGGCCGCTGAGCTCGGCCC 33112
Query 112769 ATATGAAACCTTTGAGGGTTCTCCAGCTTCA-CAAGGGG-TGCTTCAATTTGATATGTGG 112826
|| || || | || || ||||| | ||| ||||||| | || || | || ||||||
Sbjct 33113 CTACGAGACGTACGAAGGCTCTCCGG--TCAGCAAGGGGATCCTCCAGTACGACATGTGG 33170
Query 112827 GAAGGTGA-GACCAAGCTTCACTACGACTGGGACGCT-CTCAAGGAACGCATCAAGGAGA 112884
| || || | ||| || | |||| ||| ||| || |||||| ||| |
Sbjct 33171 G-AGAAGACGCCCACCGATCTGTTGGACT-GGAAGCTGCTGAAGGAAAAGATCGCCAAAC 33228
Query 112885 AGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCT 112944
| || | | ||||| || || |||| || ||||| || |||||||| ||||| |||
Sbjct 33229 ACGGCGTGAGGAACAGCCTACTGCTGGCCCCGATGCCCACGGCCTCCACAGCACAGATCC 33288
Query 112945 TGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCG 113004
|||| || || || | | ||| ||||||| | |||||||| | || ||||
Sbjct 33289 TGGGCAACAACGAGTCTATCGAAGCCTACACCAGCAACATCTACACCCGCAGGGTCCTCT 33348
Query 113005 CGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCT 113064
| ||||||||| ||| || || ||||| | | ||||| | |||| || || |
Sbjct 33349 CTGGAGAGTTTCAGATCGTGAATCCTCATCTGCTCAAAGACCTGACGGAGAGGGGGCTGT 33408
Query 113065 GGTCCAAGGATATGAAG 113081
|| | |||| ||||||
Sbjct 33409 GGAACGAGGAGATGAAG 33425
>seq508
Length=211378
Score = 91.5 bits (100), Expect = 2e-13
Identities = 77/95 (81%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 102204 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 102263
|| ||||||||||||||||| || || ||| || || ||||||||||||||| ||||
Sbjct 169527 GTGGAGGGTATCTTCTTCTCAGGCTCATTCGCTGCCATCTATTGGCTCAAGAAGAGAGGG 169586
Query 102264 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 102298
|| ||||| ||||| ||||||||| ||||| ||
Sbjct 169587 CTAATGCCTGGTCTTACCTTCTCCAATGAGCTGAT 169621
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620693563091680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |