Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq67 219 5e-52 seq508 91.5 2e-13 >seq67 Length=1635559 Score = 219 bits (242), Expect = 5e-52 Identities = 901/1397 (64%), Gaps = 38/1397 (3%) Strand=Plus/Plus Query 111704 GTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAG 111763 ||||| |||||| | || || |||||||| || ||||| || || || ||||||| Sbjct 32048 GTTCACCCACGCCTCGCCTACTCTCTTCAATGCCGGTACCAACAGGCCTCAGCTGTCCAG 32107 Query 111764 TTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGA 111823 || ||||| | || | ||||| || ||| | ||||| |||| |||||| | | Sbjct 32108 CTGCTTCCTGCTCGCCATGAAGGACGACAGCATCGAAGGCATCTACGACACTCTGAAGCA 32167 Query 111824 ATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATG--TCAGA 111881 ||||||| |||||||||| |||||| || ||||| || || | || ||||| Sbjct 32168 GTGTGCCCTCATCTCAAAGTCGGCTGGAGGAATCGGTGTGGCTGTCA--GCTGCATCAGA 32225 Query 111882 GCCAACAAGTCTCGT-ATTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCT 111940 | |||| | | ||| || ||||| || | ||| | || | | || ||||| Sbjct 32226 TC-AACAGGGAGCTACATTGCCGGCACAAACGGCAACTCAAACGGGTTAGTCCCCATGCT 32284 Query 111941 TCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGTCGCAAG----GGAT 111996 | || | ||| ||| ||||| ||||| |||| | || | | ||| ||| Sbjct 32285 GAGAGTTTACAACAACACGGCGCGTTATGTCGACCAGGGCGG-CAACAAAAGACCCGGAG 32343 Query 111997 CTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTC 112056 | |||| | || || ||||| |||||| ||| | | || ||||| ||| || Sbjct 32344 CCTTCGCCATGTACCTGGAGCCGTGGCACTTCGATGTGTTTGACTTCCTGGAGCTGAAGA 32403 Query 112057 TCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAG 112116 ||| ||| | |||||| | || | | || || |||| ||| || ||||| || | Sbjct 32404 AGAACACAGGAAAGGAGGAGCAGAGGGCCAGAGACCTTTTCTACGCCCTGTGGATCCCTG 32463 Query 112117 ATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAAT---TGGTCTCTCTTTTGTCCAGACA 112173 | | |||||||||||||| ||| || | | |||||||| | ||||| | Sbjct 32464 ACTTGTTCATGAAGAGAGT---GGAAAGCAACCAAGACTGGTCTCTGATGTGTCCCAATG 32520 Query 112174 AGGCACCCGGTCTCTCCGA-TGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTAC 112232 || ||||| || ||| || | ||||||||||||||| |||||||| || Sbjct 32521 AGTGTCCCGGGCTGGACGAGTGTTG-GGGTGAGGAGTTTGAGAAGCTCTACACTTCATAT 32579 Query 112233 GAGGAAGAAAGTCGGGCGACTGCGAC-GGTGCCAGCTGCCGATGTGTGGAAAGCTATTCT 112291 ||| | || | ||| | ||| |||| ||| | |||||| | || || | Sbjct 32580 GAGAAGGAGGGGAGGGTCAA-GCGTGTGGTGAAGGCTCAGCAGGTGTGGCACGCCATCAT 32638 Query 112292 CAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAA 112351 |||| || || || || ||||| || || ||||| |||||||||||||| |||| ||| Sbjct 32639 TGAGTCCCAGACAGAAACCGGTACGCCGTACATGCTGTACAAAGACGCCTGCAACCGAAA 32698 Query 112352 GAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGA 112411 ||| || || ||||| |||| ||||| || ||||||||| ||||||||| | || Sbjct 32699 GAGCAACCAGCAGAATCTGGGCACAATCAAAAGCAGCAACCTCTGCACAGAAATCGTTGA 32758 Query 112412 ATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTA 112471 || || | | |||||| || || ||||| || || || || || ||| || ||| Sbjct 32759 ATACACCAGCGACGATGAGGTAGCGGTCTGTAATCTGGCCTCCATTGCGCTCAACATGTA 32818 Query 112472 TGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAA---AC 112528 || || ||| ||| ||||| | | ||||||| || || ||| | Sbjct 32819 CGTCACCCCTGAG---CGGACTTTTGACTTTAAAAAACTAGCATCTGTGACCAAAGTCAT 32875 Query 112529 TGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCG 112588 |||| | |||| | |||| | || || | || || || || || || Sbjct 32876 TGTC---AGAAACTTGAACAAGATCATCGAGATTAACTTCTATCCAGTGCCCGAAGCGGA 32932 Query 112589 TAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATT 112648 || || || | | | ||| | ||||| || |||| || |||||| | ||||||| || Sbjct 32933 GAAGTCCAACAAGCGTCACAGGCCAATAGGAATCGGCGTTCAAGGTTTGGCGGATGCCTT 32992 Query 112649 CATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATT 112708 ||| || || || | ||||| | ||| ||| || | || | || || Sbjct 32993 CATCCTGATGCGTTACCCGTTTGAAAGCCCCGAGGCGCAGCTGCTGAACATCCAAATCTT 33052 Query 112709 TGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCC 112768 |||||| || || ||||||| || |||||||| | ||| |||| | | || || Sbjct 33053 TGAGACCATCTACTACGCCGCCCTGGAGGCGAGCTGCGAGCTGGCCGCTGAGCTCGGCCC 33112 Query 112769 ATATGAAACCTTTGAGGGTTCTCCAGCTTCA-CAAGGGG-TGCTTCAATTTGATATGTGG 112826 || || || | || || ||||| | ||| ||||||| | || || | || |||||| Sbjct 33113 CTACGAGACGTACGAAGGCTCTCCGG--TCAGCAAGGGGATCCTCCAGTACGACATGTGG 33170 Query 112827 GAAGGTGA-GACCAAGCTTCACTACGACTGGGACGCT-CTCAAGGAACGCATCAAGGAGA 112884 | || || | ||| || | |||| ||| ||| || |||||| ||| | Sbjct 33171 G-AGAAGACGCCCACCGATCTGTTGGACT-GGAAGCTGCTGAAGGAAAAGATCGCCAAAC 33228 Query 112885 AGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCT 112944 | || | | ||||| || || |||| || ||||| || |||||||| ||||| ||| Sbjct 33229 ACGGCGTGAGGAACAGCCTACTGCTGGCCCCGATGCCCACGGCCTCCACAGCACAGATCC 33288 Query 112945 TGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCG 113004 |||| || || || | | ||| ||||||| | |||||||| | || |||| Sbjct 33289 TGGGCAACAACGAGTCTATCGAAGCCTACACCAGCAACATCTACACCCGCAGGGTCCTCT 33348 Query 113005 CGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCT 113064 | ||||||||| ||| || || ||||| | | ||||| | |||| || || | Sbjct 33349 CTGGAGAGTTTCAGATCGTGAATCCTCATCTGCTCAAAGACCTGACGGAGAGGGGGCTGT 33408 Query 113065 GGTCCAAGGATATGAAG 113081 || | |||| |||||| Sbjct 33409 GGAACGAGGAGATGAAG 33425 >seq508 Length=211378 Score = 91.5 bits (100), Expect = 2e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 102204 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 102263 || ||||||||||||||||| || || ||| || || ||||||||||||||| |||| Sbjct 169527 GTGGAGGGTATCTTCTTCTCAGGCTCATTCGCTGCCATCTATTGGCTCAAGAAGAGAGGG 169586 Query 102264 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 102298 || ||||| ||||| ||||||||| ||||| || Sbjct 169587 CTAATGCCTGGTCTTACCTTCTCCAATGAGCTGAT 169621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620693563091680