Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17]
6,294 sequences; 619,300,777 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq67 250 3e-61
seq30 95.1 1e-14
seq508 84.2 3e-11
>seq67
Length=1635559
Score = 250 bits (276), Expect = 3e-61
Identities = 968/1492 (65%), Gaps = 42/1492 (3%)
Strand=Plus/Minus
Query 105841 CTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGTTGAC 105900
|||||| |||| | ||| || || ||| | | || || |||| ||||| || ||
Sbjct 33425 CTTCATCTCCTCGTTCCACAGCCCCCTCTCCGTCAGGTCTTTGAGCAGATGAGGATTCAC 33366
Query 105901 AATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAA 105960
||| ||||||||| | |||| || | |||||||| | ||||||| ||| |
Sbjct 33365 GATCTGAAACTCTCCAGAGAGGACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCTTCGAT 33306
Query 105961 GCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAG 106020
| || || || |||| ||| ||||| |||||||| || ||||| || |||| || ||
Sbjct 33305 AGACTCGTTGTTGCCCAGGATCTGTGCTGTGGAGGCCGTGGGCATCGGGGCCAGCAGTAG 33246
Query 106021 ACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAG 106080
||||| | | || | || ||| |||||| || | | |||||| | ||
Sbjct 33245 GCTGTTCCTCACGCCGTGTTTGGCGATCTTTTCCTTCAGCAGCTTCCAGTCCAACA-GAT 33187
Query 106081 C--TTGGTTTCACCTTCCCACATATCAAATTGAAGCA-CCCCTTGG-GACGTGGGAGAAC 106136
| | || || || ||||||| || | || || | ||||||| ||| ||||| |
Sbjct 33186 CGGTGGGCGTCTTCT-CCCACATGTCGTACTGGAGGATCCCCTTGCTGACC--GGAGAGC 33130
Query 106137 CCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATG 106196
| || | ||||| |||| || | | | |||| || |||||||||||||||| |
Sbjct 33129 CTTCGTACGTCTCGTAGGGGCCGAGCTCAGCGGCCAGCTCGCAGCTCGCCTCCAGGGCGG 33070
Query 106197 CGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATG 106256
||| || ||||| |||||||| | |||| | || || || ||||| |
Sbjct 33069 CGTAGTAGATGGTCTCAAAGATTTGGATGTTCAGCAGCTGCGCCTCGGGGCTTTCAAACG 33010
Query 106257 CGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGT 106316
||| || || || || ||||||| | ||||||||| || | || || || ||||
Sbjct 33009 GGTAACGCATCAGGATGAAGGCATCCGCCAAACCTTGAACGCCGATTCCTATTGGCCTGT 32950
Query 106317 GTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGT 106376
| ||| | || ||||| ||| || ||||| || || | || |||| ||
Sbjct 32949 GACGCTTGTTGGACTTCTCCGCTTCGGGCACTGGATAGAAGTTAATCTCGATGATCTTGT 32890
Query 106377 TTAGATTTTTGGTAACAATCTTTGTGATTTCA--TGA-AGTTTTTCATAATCAAAAGTGC 106433
| | ||| || ||||| | || | || || ||||||| | | |||||||| |
Sbjct 32889 TCAAGTTTCTG---ACAATGACTTTGGTCACAGATGCTAGTTTTTTAAAGTCAAAAGTCC 32833
Query 106434 GAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCT 106493
| ||| |||| ||| | || || || || |||| ||| || || || ||
Sbjct 32832 G---CTCAGGGGTGACGTACATGTTGAGCGCAATGGAGGCCAGATTACAGACCGCTACCT 32776
Query 106494 CATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCA 106553
|||| | ||||| || | |||||||| || | |||| || || || || ||||
Sbjct 32775 CATCGTCGCTGGTGTATTCAACGATTTCTGTGCAGAGGTTGCTGCTTTTGATTGTGCCCA 32716
Query 106554 AATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCG 106613
||||| ||||| |||||| |||||| || || ||||| |||||||| ||||| || |
Sbjct 32715 GATTCTGCTGGTTGCTCTTTCGGTTGCAGGCGTCTTTGTACAGCATGTACGGCGTACCGG 32656
Query 106614 TCTCCGTCTGTGACTTGAGAATTGCCTTCCACACAT-CGGCGGCTGGTACAATGGCGTTG 106672
| || ||||| |||| | || || | |||||| | | | | || || || |||
Sbjct 32655 TTTCTGTCTGGGACTCAATGATGGCGTGCCACACCTGCTGAGCCTTCACCACACGC-TTG 32597
Query 106673 GCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCA-CCCACCGCGTC 106731
||| |||||| ||| || |||||||| |||||||||||| |||| | | ||
Sbjct 32596 ACCCTCCCCTCCTTCTCATATGAAGTGTAGAGCTTCTCAAACTCCTCACCCCAACAC-TC 32538
Query 106732 GGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCA---TTGACCACCCTCCTCAAC 106788
| || || || || | ||||| | |||||||| ||| | ||| ||
Sbjct 32537 GTCCAGCCCGGGACACTCATTGGGACACATCAGAGACCAGTCTTGGTTGCTTTCC---AC 32481
Query 106789 CCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTC 106848
| ||||||||| | ||| || |||||||||| | || || ||||| || |||
Sbjct 32480 TCTCTTCATGAACAAGTCAGGGATCCACAGGGCGTAGAAAAGGTCTCTGGCCCTCTGCTC 32421
Query 106849 TTCGTCACCTTGGTTGAGTCGT-AACTCAAGGAACTCCATGATATCCGCGTGCCATGGCT 106907
|| | ||| ||| || | | ||| ||||| || | | ||| |||||| ||||
Sbjct 32420 CTCCTTTCCTGTGTT-CTTCTTCAGCTCCAGGAAGTCAAACACATCGAAGTGCCACGGCT 32362
Query 106908 CAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCT 106963
| || || | |||| | ||| |||| | | || | || | ||||| |||||
Sbjct 32361 CCAGGTACATGGCGAAGGCTCCGGGTCTTTTGTTG-CCGCCCTGGTCGACATAACGCGCC 32303
Query 106964 GTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGA 107023
||| ||| | || | ||||| || | | || | ||| | || ||||| || |
Sbjct 32302 GTGTTGTTGTAAACTCTCAGCATGGGGACTAACCCGTTTGAGTTGCCGTTTGTGCCGGCA 32243
Query 107024 ATACGAGATTTAT-TGGCTCTCA--CATCATGGATGTGCATCCCAATACCCCCAGCCCAC 107080
|| || | | | | ||| | || | || || || || || |||||| ||
Sbjct 32242 AT-GTAGCTCCCTGTTGATCTGATGCAGC--TGACAGCCACACCGATTCCTCCAGCCGAC 32186
Query 107081 TTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTG 107140
|||||||| | ||||||| | | ||||| | ||||| || | ||| ||| |||||
Sbjct 32185 TTTGAGATGAGGGCACACTGCTTCAGAGTGTCGTAGATGCCTTCGATGCTGTCGTCCTTC 32126
Query 107141 TTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTT 107200
|||||| |||||||| ||||||| ||| || || ||||| ||||||||||| ||
Sbjct 32125 ATGGCGAGCAGGAAGCAGCTGGACAGCTGAGGCCTGTTGGTACCGGCATTGAAGAGAGTA 32066
Query 107201 GGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATC 107259
|| | ||||| ||||| || | | |||| | || ||| ||||| | | | | ||
Sbjct 32065 GGCGAGGCGTGGGTGAAC-CACTTCTCCGACAGCAGGTTGTAGGTCTCAATGGCTGCGTC 32007
Query 107260 AATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGGT 107311
||||| | ||||||||| | | || | ||| | ||||| ||||||
Sbjct 32006 GATGTCCGTTCTGTGGATGCCAACAGAAACCCTCATGAGCATGTGCTGGGGT 31955
>seq30
Length=3550406
Score = 95.1 bits (104), Expect = 1e-14
Identities = 106/142 (75%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 106505 GTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGG 106564
|||||||||| || ||||| |||| |||| || || || |||| |||| |||
Sbjct 773353 GTGTACTCTACGATCTCTGTGCACAGGTTGCTGGATTTGATGGTGCCCAGGTTCTGCTGG 773294
Query 106565 TTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGT 106624
|| ||||| ||||| ||||||||||| |||||||| || || ||||| ||||||||
Sbjct 773293 TTGCTCTTCCCATTGCAGGCATCCTTGTAAAGCATGTACGGGGTTCCCGTTTCCGTCTGA 773234
Query 106625 GACTTGAGAATTGCCTTCCACA 106646
|||| || || || | |||||
Sbjct 773233 GACTCGATGATGGCGTACCACA 773212
>seq508
Length=211378
Score = 84.2 bits (92), Expect = 3e-11
Identities = 84/109 (77%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 117293 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTCT 117352
||||||| | | ||| || ||||| |||||| || || ||||| || || | |||||
Sbjct 169635 CCTCATCCCTGCTAATCAGCTCATTGGAGAAGGTAAGACCAGGCATTAGCCCTCTCTTCT 169576
Query 117353 TCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCAC 117401
| | |||||| || || |||||| || ||||||||||||||||||||
Sbjct 169575 TGAGCCAATAGATGGCAGCGAATGAGCCTGAGAAGAAGATACCCTCCAC 169527
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589934383260560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |