Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17]
6,294 sequences; 619,300,777 total letters
Query= NC_015265.1
Length=37236
Score E
Sequences producing significant alignments: (Bits) Value
seq2742 127 5e-25
>seq2742
Length=6849
Score = 127 bits (140), Expect = 5e-25
Identities = 807/1278 (63%), Gaps = 80/1278 (6%)
Strand=Plus/Plus
Query 32320 CGGATCCGCAACGTCCTGAAGAGCCGGCAGATCGGCGCGACCTGGTACTTCGCGCGCGAG 32379
||||||||| | |||||||| || |||||||| ||||| |||||||| |||
Sbjct 1135 CGGATCCGCCATATCCTGAAGTCGCGCCAGATCGGGCTGACCTACTACTTCGCCGCCGAA 1194
Query 32380 GCGTTGCTCGACGCGCTGAACACAGGCCGCAATCAAATCTTCCTGTCGGCCAGCAAGGCA 32439
||||| | ||||| || || || ||| || || |||||||| || ||| ||
Sbjct 1195 GCGTTCATGGACGCAGTGCTGACCGGGGACAACCAGATTTTCCTGTCCGCGAGCCGCGCC 1254
Query 32440 CAGGCGCACGTGTTCCGCCAGTACATCGTGCAGTTCGCGAAAGACGCGGTCGACGTCGAG 32499
||| | | ||||||||| |||||||| |||||| | | |||| |||||
Sbjct 1255 CAGTCCGAAGTGTTCCGCAGCTACATCGTCGCGTTCGCCGCGCAATGGTTCGATATCGAG 1314
Query 32500 CTGAAGGGCGACCCGATCGTGCTGCCGAACGGTGCGACGCTGT-------ACTTC----- 32547
||| ||| | || ||| | || || | | | || || ||| |
Sbjct 1315 CTGTCCGGCAATCCCATCATCTTGAGCAAAGACGGCAAGCCGTGGGCGGAACTGCGGTTT 1374
Query 32548 CTCGGCACCAACGCGCGCACTGCGCAGAGCTACCACGGCAACCTGTATTTCGACGAGTAC 32607
||| || ||| ||| |||||||||||||||||| || | || |||||||
Sbjct 1375 CTCTCGACGAACAGCAACACGGCGCAGAGCTACCACGGCCACGTCTACATCGACGAAGTG 1434
Query 32608 TTCTGGGTGCCGCGCTTCCAGGAGCTGCGCAAGGTCGCCTCCGGCATGGCGATTCACGAC 32667
|||||| | || |||||| |||||| | ||| ||| || ||||| || |
Sbjct 1435 TTCTGGATCCCCAATTTCCAGAAGCTGCAGACGGTGGCCAGCGCGATGGCCTCGCATGCA 1494
Query 32668 CAGTGGCGGCAGACGTATTTCTCGACGCCGTCGAGCC-TCGCGCACGACGCTTATCCGTT 32726
||||||| | ||| || ||||| ||||| | || | ||||| | || |||||||
Sbjct 1495 AAGTGGCGCCTGACCTACTTCTCCACGCCCA-GCGCGGTAACGCACCAGGCATATCCGTA 1553
Query 32727 CTGGTCGGGCAAGCTGTTC---AACCGTGGCCGACCGAAAGATCAGCACGTATCGATCGA 32783
|||| | ||| || |||| ||| | || | |||||| || || ||
Sbjct 1554 CTGGACCGGCGAGGAGTTCCGCAACAGCAAGCG-CGGAAAGA--AGGCCGGGCCG----- 1605
Query 32784 CATTTCGCA-CGCGGCGCTGGCC---GCGGGC-CGTTCGTGTCAGGACGGCCAGTGGCGC 32838
| | || || |||| | | || ||| |||| ||| | |||||| |||||||||
Sbjct 1606 --TGGCCCAGCGAAGCGCAGATCCATGCCGGCGCGTT-GTGCCCGGACGGGCAGTGGCGC 1662
Query 32839 CAGATCGTCACGGTCGAGGACGCCGTGCGCGGCGGTTGCAACAGCGGGGCGCGGCCGCTC 32898
|| || ||||| | | |||||| | |||||| |||||| ||
Sbjct 1663 AAGGTCATCACGATTCAAGACGCCATCGCCGGCGGCTGCAAC---------------CTG 1707
Query 32899 TTCAATCTCGACCGGCTACGACTGGAATACAGCCCCGAGGAATACGCGAACCTGCTGCTG 32958
||| | || || || || | ||||| ||| | ||| | || | ||| | ||
Sbjct 1708 TTCGACCTGGAGCGCCTGCAGCTGGAGTACGACGAAGAGCGCTTCGAACAGCTGTTCATG 1767
Query 32959 TGCCAGTTCATCGACGATTCGCTGTCGGTTTTCCCGCTGACGGTGTTGCAGCCGTGCATG 33018
||| ||||||||||| | | | | | ||| | |||| | || ||| |||
Sbjct 1768 TGCAAGTTCATCGACAGCACCCAGGCTGCATTCGCCTTGACCGACCTGGAGCGCTGCTAT 1827
Query 33019 GTCGATACCTGGGAGGTGTGGGACGACTTCAAGCC--ACTGTACCTGCGCCCGTTCGGCG 33076
||| || || | ||| |||| | | || || | || ||| ||||||| |
Sbjct 1828 TCCGA---CTTGGGCCTATGGACTGACTACGACCCGGACAG--CCCGCGGCCGTTCGACA 1882
Query 33077 ACGAGGAGGTCTGGATCGGCTACGACCC--GTCGCATACGGG-CGACAGCGCCGGCTGCG 33133
|| ||||||| |||| || ||||| |||| | || | |||| ||| || ||||
Sbjct 1883 ACCGCCCGGTCTGGCTCGGGTATGACCCCAGTCGAACCCGCGACGAC-GCGACG--TGCG 1939
Query 33134 TGGTGATTGCGCCGCCGAAGCGTCCGGGCGGGAAGTTCCGCGTGCTCGAGCGGTTCCAGT 33193
| || |||| ||||| | |||||||| |||||||| | || ||| | | |
Sbjct 1940 TTGTCGTTGCCCCGCCCCTGGAGCCGGGCGGCAAGTTCCGAATCCTGGAGAAGCACAGCT 1999
Query 33194 GGCACGGTTTGGACTTCG---AGGCG-CAGGCCGCGCAAATCGAAGCGCTGACGCG-GCG 33248
||| || ||| ||| | || ||||| ||| ||||| |||| ||| |||
Sbjct 2000 GGCGGGG----GACGTCGTTCACGCATCAGGCAAAGCAGATCGAGAAGCTGT-GCGAGCG 2054
Query 33249 CTATCGCGTGACCTACATCGGCATTGACACGACCGGGATCGGGCAGGGCGTGTATCAGCT 33308
|| ||| |||||||||| |||| ||||| |||| | || |||| | ||
Sbjct 2055 CTTCAACGTCCAGCACATCGGCATCGACATTACCGGCGTCGGTTACGGGGTGTTCGACCT 2114
Query 33309 CGTCACGAAGTTTTTCCCGGCCGCGACGCCGTTCCACTACTCGGTGGAAATCAAGACCGC 33368
|| | | || ||||| || || ||| | |||||| |||| |||| ||
Sbjct 2115 GGTGAAAGACTTCTTCCCCCGGGCTACTCCGATTCACTACAGCCTGGAGGCGAAGAATGC 2174
Query 33369 GCTGGTGATGAAGGCGCAGAACGTGATCC---GCAAGGGTCGGCTCGAGTTCGACGCCGG 33425
|||||| | ||||| ||| ||||||||| ||||| || |||| | || |||||
Sbjct 2175 CCTGGTGCTCAAGGCCCAGGACGTGATCCAGGGCAAG---CGCATCGAATGGGATGCCGG 2231
Query 33426 CTGGAACGATCTCGCCGCGTCATTCATGGCGATCAAGAAAACCATCACGCCCAGCGGCCT 33485
|||| ||| |||| ||| | ||| || |||||||| || |||| ||||||||||
Sbjct 2232 TTGGACCGAGGTCGCGGCGGCGTTCCTGTCGATCAAGCGCGGCACCACGGCCAGCGGCCT 2291
Query 33486 GCAGGTCACGTACAAGGCGAGCCGCTCGGAAGAAGCGAGCCACGGCGATCTCGCCTGGGC 33545
| | || |||| ||| | | || | | | |||| | ||| | |||||| |
Sbjct 2292 ---GATTACCTACAGCGCGTCTAGGACTGAGGCAACCGGCCATGCCGACGTGGCCTGGTC 2348
Query 33546 GTGCATGCACGCGCTGGC 33563
| |||||| ||||||||
Sbjct 2349 GATCATGCATGCGCTGGC 2366
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 119024703279944
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