Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_015295.1 Length=47279 Score E Sequences producing significant alignments: (Bits) Value seq120 87.8 5e-13 >seq120 Length=812315 Score = 87.8 bits (96), Expect = 5e-13 Identities = 127/177 (72%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 37598 TGGCGAAAGAGTTACGCTGCCCGGTTATAGCATTGTCTCAGTTGAACCGTAATTTGGAGC 37657 |||| |||||||| ||||| || || || | || |||||| ||| | | |||| Sbjct 51962 TGGCCAAAGAGTTCAATTGCCCCGTCATCGCGCTATCGCAGTTGTCCCGCCAGTGTGAGC 51903 Query 37658 AGCGTGCAAACAAGCGACC-GTGCAATGCCGACTTACGTGAGTCGGGCGTAATCGAGCAG 37716 |||| | |||||||| || ||| || || ||||| || ||||| |||| ||||||||| Sbjct 51902 AGCGGCCCAACAAGCGCCCTGTG-AACGCAGACTTGCGGGAGTCCGGCGCGATCGAGCAG 51844 Query 37717 GAAGCTGATGTGATTTTCATGGTTTATCGCGACGAGAAGTACAACCCGCAGACAGAG 37773 || || || | || | | || ||||| |||||| ||||||||| | || ||| Sbjct 51843 GACGCGGACATCATCATGTTCGTCTATCGAGACGAGGTCTACAACCCGGACACTGAG 51787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151159901275548