Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17]
6,294 sequences; 619,300,777 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq331 131 4e-25
>seq331
Length=323222
Score = 131 bits (144), Expect = 4e-25
Identities = 157/212 (74%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|||||||| || |||||||| || || || ||||| |||| || || | ||||||||
Sbjct 7720 ACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCC 7779
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || || ||||| || | || ||||| || ||||||||||| || || ||
Sbjct 7780 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCCTGG 7839
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108
|| || ||||||||||||||||||||| ||| || || |||||||| | |||
Sbjct 7840 ATCTTGGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCGACCTCAAGGGTGATGGTC 7896
Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || || | || || || || | |||||
Sbjct 7897 TTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 7928
Score = 127 bits (140), Expect = 5e-24
Identities = 143/190 (75%), Gaps = 6/190 (3%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|||||||| || |||||||| || || |||||||| |||| || || | ||||||||
Sbjct 11295 ACAAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCATCTTCC 11354
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|| ||||| || || ||||| || | || ||||| || ||||||||||| || || ||
Sbjct 11355 AGTTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTATCCTGG 11414
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTCAAGGGTAACCGTC 195108
|| || |||||| |||||||| ||||| |||| || || |||||||| | |||
Sbjct 11415 ATCTTGGCCTTGACATTCTCAATAGTGTC---ACTTGGCTCAACCTCAAGGGTGATGGTC 11471
Query 195109 TTTCCTGTCA 195118
|| || ||||
Sbjct 11472 TTGCCGGTCA 11481
Score = 120 bits (132), Expect = 7e-22
Identities = 116/149 (78%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|||||||| || |||||||| || || || || || |||| || || | ||||||||
Sbjct 7492 ACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGAGAGGGTGCGGCCATCTTCC 7551
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || || ||||| || | || ||||| || ||||||||||| || || ||
Sbjct 7552 AGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCCTGG 7611
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTC 195080
|| || |||||||||||||||||||||
Sbjct 7612 ATCTTGGCCTTGACGTTCTCAATGGTGTC 7640
Score = 107 bits (118), Expect = 4e-18
Identities = 131/179 (73%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 194962 TTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGT 195021
||||| |||| || || | |||||||| |||||||| || || ||||| || | ||
Sbjct 12929 TTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGC 12988
Query 195022 TGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCC 195081
||||| || ||||||||||| ||||| |||||||| ||| || ||||||||||||||
Sbjct 12989 TGGTCAGGGGGAATGCCTTCCTTGTCCTGAATTTTAGCCTTCACATTCTCAATGGTGTCG 13048
Query 195082 GAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || |||||||| | ||||| || || | || || || || | |||||
Sbjct 13049 CTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAAATCTGCAT 13107
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109392129323498
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |