Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_017981.1 Length=49981 Score E Sequences producing significant alignments: (Bits) Value seq120 145 2e-30 >seq120 Length=812315 Score = 145 bits (160), Expect = 2e-30 Identities = 215/305 (70%), Gaps = 0/305 (0%) Strand=Plus/Minus Query 25971 GTTGACCACAATTTCAGTGGTGTAGCGCTCAACGCCGTCCTTTTCCCACTTGCGGGTTTT 26030 || ||| || || || ||||||||||| | || ||||| |||||||||| |||||| Sbjct 48464 GTCGACGACGATCTCGGTGGTGTAGCGTTTCACTCCGTCTTTTTCCCACTCGCGGGTGCG 48405 Query 26031 CAGTTGCCCCTCAATGTAAACCTGTGAACCTTTCTTCAGGTACTCGCCCGCGATCTCCGC 26090 || || || | ||| ||| ||||| ||| ||||| |||||||| || || Sbjct 48404 GAGAGTGCCTTCGACGTAGCACTGGCTCCCTTTTCGCAGATACTCACCCGCGATTTCGGC 48345 Query 26091 TACCTTGCCAAACAGCACGACGCGATGCCATTCTGTCACTTCTTTCTTTTCGCCGGTCTG 26150 | |||||| || | ||| ||||| ||||| || || || | || | ||||||||| Sbjct 48344 GATCTTGCCGAAGAACACTACGCGGTGCCACTCGGTACGCTCCTGCTGCTGGCCGGTCTG 48285 Query 26151 CTTATCGTTCCAGCTTTCTGAGGTCGCTACGGTAATGTTGGCGACTGCGCCGCCATTAGG 26210 |||||| ||||||||||| ||| || | ||| ||||| | || ||| ||| || || Sbjct 48284 CTTATCTTTCCAGCTTTCGCTGGTGGCCAGGGTTATGTTCGTTACGGCGTTGCCGTTCGG 48225 Query 26211 CATGTAACGGATCTCTGGATCGTTCCCCAGGTTACCGACAAGGATTACTTTATTTACGCC 26270 |||| |||| || || ||| || ||| ||||| || || ||||| || ||||| Sbjct 48224 GGTGTAGCGGACTTCCGGGTCGCCGCCGGCGTTGCCGACGAGAATCACTTTGTTGACGCC 48165 Query 26271 GCGTG 26275 |||| Sbjct 48164 TCGTG 48160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159805655032804