Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17]
6,294 sequences; 619,300,777 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq67 419 4e-112
seq20 178 2e-39
seq683 163 5e-35
seq1442 122 2e-22
seq121 122 2e-22
seq508 107 4e-18
seq30 105 1e-17
seq77 100 5e-16
seq6 91.5 3e-13
>seq67
Length=1635559
Score = 419 bits (464), Expect = 4e-112
Identities = 1042/1567 (66%), Gaps = 40/1567 (3%)
Strand=Plus/Minus
Query 212858 CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTAT 212917
||| ||||||||||| || ||||| | |||| |||| ||| ||||| || || ||
Sbjct 33422 CATCTCCTCGTTCCACAGCCCCCTCTCCGTCAGGTCTTTGAGCAGATGAGGATTCACGAT 33363
Query 212918 CTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCT 212977
||| || || || ||||| ||||| | ||| | ||| ||||||| |||||
Sbjct 33362 CTGAAACTCTCCAGAGAGGACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCTTCGATAGA 33303
Query 212978 CTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACT 213037
||||||||| ||||| |||||||| ||| ||| |||||||| || |||| ||| || ||
Sbjct 33302 CTCGTTGTTGCCCAGGATCTGTGCTGTGGAGGCCGTGGGCATCGGGGCCAGCAGTAGGCT 33243
Query 213038 GTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGA 213097
||||||||| ||||| | | |||| | ||| ||||||| | ||||
Sbjct 33242 GTTCCTCACGCCGTGTTTGGCGATCTTTTCCTTCAGCAGCTTCCAGTCCAA-----CAGA 33188
Query 213098 CAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCT 213157
||| |||| ||| | ||||||||| |||| | ||| || ||||| || ||
Sbjct 33187 TCGGTGGGCGTC-TTCTC---CCACATGTCGTACTGGAGGATCCCCTTGCTGACCGGAGA 33132
Query 213158 GCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGC 213217
||| | ||| | ||||||||| |||| ||||||||||||| ||||| ||||||
Sbjct 33131 GCCTTCGTACGTCTCGTAGGGGCCGAGCTCAGCGGCCAGCTCGCAGCTCGCCTCCAGGGC 33072
Query 213218 AGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGG------A 213271
|||||||||||||| ||||| || | |||| ||| || ||||| ||| |
Sbjct 33071 GGCGTAGTAGATGGTCTCAAAGATTTGGATGTTCAGCAGCTGCGCCTCGGGGCTTTCAAA 33012
Query 213272 CGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGAT 213331
|| | | |||||| ||| || |||| |||| || || || ||||| || ||
Sbjct 33011 CGGGTAACGCATCAGGATG------AAGGCATCCGCCAAACCTTGAACGCCGATTCCTAT 32958
Query 213332 GGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGAT 213391
|| ||||| | | ||| ||||| || || || || ||||| |||||
Sbjct 32957 TGGCCTGTGACGCTTGTTGGACTTCTCCGCTTCGGGCACTGGATAGAAGTTAATCTCGAT 32898
Query 213392 GATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAA 213451
||||||||| | ||| | | |||||||| ||| || || | | | | ||
Sbjct 32897 GATCTTGTTCAAGTTTCTGACAATGACTTTGGTCACAGATGCTAGTTTTTTAA-AGTCAA 32839
Query 213452 CACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGC 213511
| || | | | || || || || || ||| |||||| || || || ||
Sbjct 32838 AA-GTCCGCTCAGGGGTG-ACGTACATGTTGAGCGCAATGGAGGCCAGATTACAGACCGC 32781
Query 213512 CACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGT 213571
||||| | | ||||| || | ||| || ||||| |||||||||| | ||| ||
Sbjct 32780 TACCTCATCGTCGCTGGTGTATTCAACGATTTCTGTGCAGAGGTTGCTGCTTTTGATTGT 32721
Query 213572 GCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGA 213631
|||||| ||||| ||||| |||| |||| | || ||||| |||||||| || |
Sbjct 32720 GCCCAGATTCTGCTGGTTGCTCTTTCGGTTGCAGGCGTCTTTGTACAGCATGTACGGCGT 32661
Query 213632 CCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCG 213691
||||| ||| ||||||| | | || | ||| | | | ||||| ||||| ||
Sbjct 32660 ACCGGTTTCTGTCTGGGACTCAATGATGGCGTGCCACACCTGCTGAGCCTTCACCACACG 32601
Query 213692 CCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCA 213751
| |||| |||| | | ||| || |||||||| | || || | |||||
Sbjct 32600 CTTGACC-CTCCCCTCCTT--CTCATATGAAGTGTAGAGCTTCTCAAACTCCTCACCCCA 32544
Query 213752 GACCCT-GTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTC 213810
|| || |||||| || ||||| ||||||||| || |||||| || |
Sbjct 32543 -ACACTCGTCCAGCCCGGGACACTCATTGGGACACATCAGAGACCAGTCTTGGTTGCTTT 32485
Query 213811 TGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCC 213870
||||||| |||||||| ||| |||| |||||| ||| ||| ||||| |||| ||||
Sbjct 32484 CCACTCTCTTCATGAACAAGTCAGGGATCCACAGGGCGTAGAAAAGGTCTCTGGCCCTCT 32425
Query 213871 TCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACG 213930
||| ||| ||| | ||| || ||| || || |||||||| | || ||||||||
Sbjct 32424 GCTCCTCCTTTCCTGTGTTCTTCTTCAGCTCCAGGAAGTCAAACACATCGAAGTGCCACG 32365
Query 213931 GCTCCATGTAGATGGCAAAGGCGCCCGGCC---TCTTGCCGCCCTGGTCCACCAGCCTGG 213987
|||||| ||| ||||| ||||| || || | | |||||||||||||| || | |
Sbjct 32364 GCTCCAGGTACATGGCGAAGGCTCCGGGTCTTTTGTTGCCGCCCTGGTCGACATAACGCG 32305
Query 213988 CCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCG 214047
|| ||||| | | | ||| | ||| || | |||||| || | ||||| || || |
Sbjct 32304 CCGTGTTGTTGTAAACTCTCAGCATGGGGACTAACCCGTTTGAGTTGCCGTTTGTGCCGG 32245
Query 214048 CTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACT 214107
| || || || | | || | | ||| | | | || || || || || |||
Sbjct 32244 CAATGTAGCTCCCTGTTGATCTGATGCAGCTGACAGCCACACCGATTCCTCCAGCCGACT 32185
Query 214108 TGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGA 214167
| ||||| | ||| || || ||| ||| || |||||| | |||||||| || | |
Sbjct 32184 TTGAGATGAGGGCACACTGCTTCAGAGTGTCGTAGATGCCTTCGATGCTGTCGTCCTTCA 32125
Query 214168 GGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGG 214227
| |||| ||||||||| || ||||| |||||| | || | ||||| || || |
Sbjct 32124 TGGCGAGCAGGAAGCAGCTGGACAGCTGAGGCCTGTTGGTACCGGCATTGAAGAGAGTAG 32065
Query 214228 GGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGA 214287
| ||| ||| | | |||| | || || || |||||||||| | | ||| | ||
Sbjct 32064 GCGAGGCGTGGGTGAACCACTTCTCCGACAGCAGGTTGTAGGTCTCAATGGCTGCGTCGA 32005
Query 214288 TGT-CGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCATGTGCTGGGGCCTCTCTATG 214346
||| ||| | ||||||| | || |||||| |||||||||||||| | || |
Sbjct 32004 TGTCCGTTC-TGTGGATGCCAACAGAAACCCTCATGAGCATGTGCTGGGGTCGTTC---G 31949
Query 214347 GGTCCTTT---GGGGCCCTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTAG 214403
| |||| | | ||| ||||||||||| ||||||||||||||||| |||||| ||
Sbjct 31948 GCCACTTTGCCGTTGATCTTCAGCAGGTAGGACCGCTCCAGAGTCTTGAAGCCAAAGAAG 31889
Query 214404 GAGTAGG 214410
|||||
Sbjct 31888 TTGTAGG 31882
>seq20
Length=4244138
Score = 178 bits (196), Expect = 2e-39
Identities = 175/225 (78%), Gaps = 2/225 (1%)
Strand=Plus/Plus
Query 241403 CACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCG 241462
|||||||| || ||| | |||||||||||| |||||||| || | ||| | || ||
Sbjct 2276994 CACATGTGTCAT--GACTTTCTGTTTGAGTTGAGCCACCTGCTCTCTCAGTAGAGAAGCC 2277051
Query 241463 GTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCG 241522
|| || || ||||| |||||||| | || | ||||||||| || |||||||| || | |
Sbjct 2277052 GTGTTTGAGAGTCCGGCGTTGTCTGTTTTCAACACCTTCACCTTGTCCTCCAGGCGAGAG 2277111
Query 241523 ATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTA 241582
||||| ||||||||||||| || || |||| |||||| | ||||||| || | |||
Sbjct 2277112 ATGCGCTCCAGTTTGCGCCTCCGACACTTGGAGGCTGCGAGCCGGTTCCTCAGCCGCTTG 2277171
Query 241583 CGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627
|| ||||| ||||| || ||||||| |||||| ||||| ||||||
Sbjct 2277172 CGCTCCGCTTTGATCCGCTCCTGGTTCTCCATATCGATGGGAGAC 2277216
>seq683
Length=153219
Score = 163 bits (180), Expect = 5e-35
Identities = 161/208 (77%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 241389 GCTGACAGCCTTGGCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCC 241448
|||||||||| || || ||| |||||| | ||||||||| || || || || ||||
Sbjct 63082 GCTGACAGCCGCTGCTCACGTGTGTCAGGACTTTCTGTTTGAGCTGAGCGACTTGATCCC 63023
Query 241449 GCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACTTTCT 241508
| || || ||||| || |||||||| || |||||| ||| | ||||||| ||||
Sbjct 63022 GGAGCACCGACGCCGTGTTGGACAGCCCCTGGTTGTCGTTCTTCAATCCCTTCACCTTCT 62963
Query 241509 CCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGT 241568
|||||||||| |||||||| ||||||||||||| ||||| |||||||| || | ||||
Sbjct 62962 CCTCCAGCCGGGCGATGCGCTCCAGTTTGCGCCTCCGGCACTTGGTGGCAGCTAGCCGGT 62903
Query 241569 TCCGGAGTCTCTTACGTTCCGCCTTGAT 241596
||| || ||||| || ||||| |||||
Sbjct 62902 TCCTCAGCCTCTTGCGCTCCGCTTTGAT 62875
>seq1442
Length=51939
Score = 122 bits (134), Expect = 2e-22
Identities = 169/237 (71%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 241390 CTGACAGCCTTGGCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCG 241449
||| ||||| | | | ||| | || ||||| ||||||||| || || || || |||||
Sbjct 37844 CTGGCAGCCGTTGGTGACGTGACTCATGACCTTCTGTTTGAGCTGAGCGACTTGCTCCCG 37903
Query 241450 CAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTC 241509
||| | || || || || ||| | | ||| | ||| || |||||||| |||||
Sbjct 37904 CAGCATGGCGGCAGTGGAGGCCAGGTCCGAGTTCTGGCTCTTCAGGACCTTCACCTTCTC 37963
Query 241510 CTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTT 241569
||||||||| | ||| || ||||| || || ||| || |||| || || | ||| ||
Sbjct 37964 CTCCAGCCGTGAGATCCGCTCCAGCTTCCGTTTGCGACACTTGGAAGCAGCAATGCGATT 38023
Query 241570 CCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGAGA 241626
|| || |||| ||||| || ||||| |||||||| ||||| ||| ||||| ||
Sbjct 38024 GCGCAGCTTCTTGCGTTCTGCTTTGATTCGTTCCTGTGTCTCCAGGTCAATCGGGGA 38080
>seq121
Length=790554
Score = 122 bits (134), Expect = 2e-22
Identities = 155/212 (73%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 241418 ACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGAC---AGT 241474
|||| ||| || || ||||||||||| || ||||| | | ||||| |||| ||
Sbjct 453920 ACCTTCTGCTTCAGCTGGGCCACCTGCTCACGCAGCATGTTGGCGGT---GGACGCGAGC 453864
Query 241475 CCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGT 241534
| | ||| | |||||||| ||| ||||| |||||||||| | ||| || |||||
Sbjct 453863 TCAGAGTTTTGGGACTTGAGGGTCTTGACTTTGTCCTCCAGCCTTGAGATTCGCTCCAGC 453804
Query 241535 TTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTG 241594
|| | | |||||||||| ||| || | |||||||| | | ||| | || ||||||
Sbjct 453803 TTCCTCTTCCGGCATTTGGAGGCAGCGATGCGGTTCCTCATCCGCTTTCTCTCGGCCTTG 453744
Query 241595 ATGCGTTCCTGGTCCTCCATGTCGATCGGAGA 241626
||||| ||||||| |||||||||||| || ||
Sbjct 453743 ATGCGCTCCTGGTTCTCCATGTCGATTGGGGA 453712
>seq508
Length=211378
Score = 107 bits (118), Expect = 4e-18
Identities = 95/119 (80%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214
|| |||| ||| || ||| | ||||||||| ||||||||||| | ||| |||| |||
Sbjct 169633 TCATCCCTGCTAATCAGCTCATTGGAGAAGGTAAGACCAGGCATTAGCCCTCTCTTCTTG 169574
Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGC 48273
||||| | || || ||||| ||||| ||||||||||| ||||||||||| ||||| ||
Sbjct 169573 AGCCAATAGATGGCAGCGAATGAGCCTGAGAAGAAGATACCCTCCACTGCTGCGAAAGC 169515
>seq30
Length=3550406
Score = 105 bits (116), Expect = 1e-17
Identities = 105/136 (77%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 212918 CTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCT 212977
||| || || |||||||||||||| | ||| | ||| ||||||| ||| |||
Sbjct 774299 CTGAAACTCTCCTGAGAGCACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCCTCAATGGA 774240
Query 212978 CTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACT 213037
||||||||| ||||| ||||| |||||| |||||||||||||| |||| || || ||
Sbjct 774239 CTCGTTGTTGCCCAGGATCTGGGCAGTGGAAGCTGTGGGCATGGGGGCCAAGAGCAGGCT 774180
Query 213038 GTTCCTCACTCCGTGC 213053
||||||||| || |||
Sbjct 774179 GTTCCTCACACCATGC 774164
Score = 100 bits (110), Expect = 5e-16
Identities = 84/103 (82%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 213528 GTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGG 213587
|||||||| | |||||| ||||||||||||||| || |||||||||||||||||| |||
Sbjct 773353 GTGTACTCTACGATCTCTGTGCACAGGTTGCTGGATTTGATGGTGCCCAGGTTCTGCTGG 773294
Query 213588 TTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGG 213630
|| ||| | ||| | ||||||||| |||||||| ||||
Sbjct 773293 TTGCTCTTCCCATTGCAGGCATCCTTGTAAAGCATGTACGGGG 773251
>seq77
Length=1416746
Score = 100 bits (110), Expect = 5e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 241415 AGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGT 241474
||||| | |||||| || |||||||| || |||| | | | || || || |||
Sbjct 1252025 AGGACTTTCTGTTTCAGCTGGGCCACTTGCTCCCTTAACAGGCTAGCCGTGGAGGCCAGG 1252084
Query 241475 CCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGT 241534
| | ||||| ||| ||| ||||| || |||||||||| | ||| || ||||||
Sbjct 1252085 TCGGTGTTGTGGCTCTTCAGCGTTTTCACCTTGTCCTCCAGCCTGGAGATCCGCTCCAGT 1252144
Query 241535 TTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTG 241594
|||||| || || |||| |||||| | ||||||| ||| ||||| | || || ||
Sbjct 1252145 TTGCGCATCCGACACTTGGAGGCTGCAATCCGGTTCCTGAGCCTCTTCCTCTCGGCTTTC 1252204
Query 241595 ATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627
||| | ||||| || |||||||| ||||||
Sbjct 1252205 ATGAGCTCCTGTGAATCAATGTCGATGGGAGAC 1252237
>seq6
Length=7996890
Score = 91.5 bits (100), Expect = 3e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 241418 ACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGTCCT 241477
|||| ||| || || |||||||| || |||| || ||| || || | ||| |
Sbjct 3172720 ACCTTCTGCTTCAGCTGGGCCACTTGCTCCCTGAGGACGCTGGCCGTGGATGCCAGCTCG 3172779
Query 241478 GCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTG 241537
| ||| | | || || ||| || || ||||||||||| | || | ||||||||
Sbjct 3172780 GTGTTCTGCGTTTTCAGGCTCTTGACCTTGTCCTCCAGCCGAGATATCCTCTCCAGTTTT 3172839
Query 241538 CGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATG 241597
| ||||||||||| ||| || | | ||||| || | || | ||||||||||||
Sbjct 3172840 CTTTTGCGGCATTTGGAGGCGGCTATCCTGTTCCTCAGCTTTTTTCTCTCCGCCTTGATG 3172899
Query 241598 CGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627
|| ||||||| |||||||| || ||||||
Sbjct 3172900 CGCTCCTGGTTGTCCATGTCAATAGGAGAC 3172929
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931459511656960
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