Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17]
6,294 sequences; 619,300,777 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq5 165 5e-35
seq2 116 2e-20
seq223 102 5e-16
seq631 100 2e-15
>seq5
Length=8875486
Score = 165 bits (182), Expect = 5e-35
Identities = 369/552 (67%), Gaps = 4/552 (1%)
Strand=Plus/Minus
Query 474324 GAATTGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATG 474383
|||| | ||||| |||||| | || || || || |||||| | |||| || |||
Sbjct 3525732 GAATATCTATTGGCATTGATCTGGGCACCACCTATTCTTGTGTCGGGGTTTTCCAGCATG 3525673
Query 474384 GTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTT 474443
| ||||| || || || ||||| ||||| || || ||||| || || ||||| | |
Sbjct 3525672 GCAAAGTGGAGATCATCGCCAACGACCAGGGAAACAGAACCACTCCCAGCTATGTGGCCT 3525613
Query 474444 TTACTGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTG 474503
||||||| || || || |||||||||||||| || |||| | ||| || || |
Sbjct 3525612 TTACTGACACAGAGAGGCTCATTGGAGATGCTGCCAAGAATCAGGTTGCCATGAACCCCG 3525553
Query 474504 TTAATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCC 474563
| || || || |||||||| || || | || || | || ||| || | |||||
Sbjct 3525552 TCAACACAATCTTTGATGCCAAGAGGCTCATCGGGAGAAAGTTTACCGACCCTGTTGTCC 3525493
Query 474564 AATCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAG 474623
| ||||| ||| | ||||| || || ||||| |||| | | || ||||| | |
Sbjct 3525492 AGTCTGACATGAAGCTCTGGCCCTTCAAAGTGATCAATGATAGCGGAAAACCCAAAGTCC 3525433
Query 474624 AAGC--AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGT 474681
| | | || | ||| || || ||| || | || ||| |||| || || |||||
Sbjct 3525432 AGGTTGAGTATAA--AGGGGAGACCAAAGCCTTCTACCCAGAAGAAATCTCCTCCATGGT 3525375
Query 474682 TTTAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGT 474741
| | |||||||| | | ||| | || || |||||| |||| | | |||||
Sbjct 3525374 CCTGGTTAAAATGAAGGAGATCGCTGAAGCCTACCTGGGACAAAAAGTGTCAAACGCAGT 3525315
Query 474742 AATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAG 474801
|| || |||||||| ||||||||||| || || | ||||| || || || || ||
Sbjct 3525314 CATCACAGTTCCAGCTTATTTTAATGACTCCCAGAGGCAAGCCACCAAGGACGCTGGGGT 3525255
Query 474802 AATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTA 474861
|| | || || |||||| | | || || ||||| || |||||||| || | || ||
Sbjct 3525254 GATCTCTGGACTGAATGTTCTGAGGATCATAAATGAGCCCACAGCAGCAGCCATCGCCTA 3525195
Query 474862 TGGTCTTGATAA 474873
|| || |||||
Sbjct 3525194 CGGCCTGGATAA 3525183
Score = 141 bits (156), Expect = 6e-28
Identities = 445/677 (66%), Gaps = 12/677 (2%)
Strand=Plus/Minus
Query 475496 ACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTT 475555
|||||||||||| | || ||| | | || || || || || ||| |||| ||
Sbjct 3524950 ACTGCTTGTGAAAGAGCAAAGAGGACCCTGTCCTCCAGCACCCAGGCTAGCCTTGAGATT 3524891
Query 475556 GATTCTCTTTTTGAAGGAATTGA-TTATAATACTCTTATTACAAGGGCTAAATTTGAAGA 475614
|| ||||| ||||| || || || || || ||| || |||||||| ||||| ||
Sbjct 3524890 GACTCTCTGTTTGAGGGTATCGACTTCTACACCTCA-ATCACAAGGGCACGCTTTGAGGA 3524832
Query 475615 TATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGT-TCTCAGAGATT 475673
| || || ||||| || |||| | || || ||||| |||| ||| ||||
Sbjct 3524831 GCTCAACTCAGAGCTCTTCAGGGGAACACTGGATCCAGTTGAG-AAGTCTCTGCAAGATG 3524773
Query 475674 CTAAACTTGACAAATCACAAG-TCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATT 475732
| || || || || || |||| |||||||||| || || || || || || |||||||||
Sbjct 3524772 CCAAGCTGGATAAGTC-CAAGATCCATGAAATCGTCCTGGTTGGTGGCTCCACAAGAATT 3524714
Query 475733 CCAAAAATAAGAGAAATGCTTTCATCA-TATTTTAATGGTAAAAAGTTAAATGAAAGTGT 475791
|| ||||| |||| ||| || | | ||||||||| | | | || || | || |
Sbjct 3524713 CCCAAAAT-CCAGAAGCTCTTGCAGGACTTTTTTAATGGCAGAGAATTGAACAAGAGCAT 3524655
Query 475792 AAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCA 475851
|| || ||||||||||| || ||||| || || ||||| || ||||| | ||| |
Sbjct 3524654 CAACCCAGATGAAGCTGTGGCCTATGGTGCAGCAGTCCAGGCTGCTATCCTGATGGGTGA 3524595
Query 475852 ATCAGACGAGAAACTAAATAATATT--GTACTTGTTGACGTAACTCCACTTTCATTAGGT 475909
|| ||||| | || ||| |||| | || || |||| || || | ||
Sbjct 3524594 --CACTTCAGAAAATGTCCAAGATTTGCTACTGCTGGATGTGGCTCCTCTGTCTCTGGGC 3524537
Query 475910 CTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGC 475969
|||| || | || || ||||||| | | || | |||| || | ||||| |
Sbjct 3524536 ATTGAGACTGCAGGTGGAGTTATGACACCTTTAATCAAACGAAACACCACCATCCCCACC 3524477
Query 475970 AAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATC 476029
|| | | | | || || || ||||| ||||| || || ||| || || |
Sbjct 3524476 AAGCAGACCCAGATCTTCTCTACATATTCAGATAACCAGCCAGGTGTGCTGATTCAGGTG 3524417
Query 476030 TTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAA 476089
| ||| ||||| ||| | || || || || ||| || || | ||| | || |
Sbjct 3524416 TATGAGGGTGAGAGAGCCATGACCAAGGACAACAACCTCCTCGGCAAGTTTGAGCTCACA 3524357
Query 476090 GGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCA 476149
||||| |||||||||||| |||| || || || | || || || || || ||||||||
Sbjct 3524356 GGTATCCCTCCTGCTCCCCGAGGTGTCCCACAGGTGGAGGTAACCTTCGACATTGATGCC 3524297
Query 476150 AATGGTATTCTTAATGT 476166
||||| ||||| |||||
Sbjct 3524296 AATGGAATTCTGAATGT 3524280
>seq2
Length=11018341
Score = 116 bits (128), Expect = 2e-20
Identities = 111/142 (78%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794
||||||| ||||| ||||| || || || ||||| || || |||||||| ||||||||||
Sbjct 7191457 ATGCAGTTATTACAGTTCCTGCTTACTTCAATGACTCCCAGCGTCAAGCCACTAAAGATG 7191398
Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854
| |||| ||||| || |||||||| | || || || ||||| ||||| || || ||
Sbjct 7191397 CTGGAACCATTGCTGGGCTTAATGTGCTGCGCATCATCAATGAGCCAACTGCTGCAGCCA 7191338
Query 474855 TTGCTTATGGTCTTGATAAGAA 474876
|||||||||| || || || ||
Sbjct 7191337 TTGCTTATGGCCTGGACAAAAA 7191316
Score = 102 bits (112), Expect = 5e-16
Identities = 107/141 (76%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 476032 TGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGG 476091
||||||||||||| | || || || ||||| | || || | ||| | || ||
Sbjct 7190243 TGAAGGTGAAAGAGCCATGACCAAGGACAATAATATTCTGGGCAAATTTGAGCTGACTGG 7190184
Query 476092 TATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAA 476151
|||||| ||||| |||||||| || ||||| ||||| || |||||||| |||||||| ||
Sbjct 7190183 TATTCCACCTGCACCCAGAGGTGTCCCTCAGATTGAGGTGACTTTTGACATTGATGCCAA 7190124
Query 476152 TGGTATTCTTAATGTTACTGC 476172
||| ||||| ||||| ||||
Sbjct 7190123 TGGCATTCTCAATGTATCTGC 7190103
>seq223
Length=448970
Score = 102 bits (112), Expect = 5e-16
Identities = 112/149 (75%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 474728 GTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACT 474787
|||||| |||| ||| | ||||| || || || || ||||| ||||| || || || ||
Sbjct 201998 GTAACTAATGCTGTAGTGACTGTGCCTGCCTACTTCAATGACTCTCAGCGCCAGGCTACC 201939
Query 474788 AAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCA 474847
|||||||| || | ||| | || || ||||| | ||||| || ||||||||||| ||
Sbjct 201938 AAAGATGCAGGGACCATTTCTGGGCTGAATGTGCTGCGTATCATCAATGAACCAACTGCT 201879
Query 474848 GCCGCACTTGCTTATGGTCTTGATAAGAA 474876
|| || |||||||||| || || || ||
Sbjct 201878 GCTGCTATTGCTTATGGCCTCGACAAAAA 201850
>seq631
Length=169947
Score = 100 bits (110), Expect = 2e-15
Identities = 104/135 (77%), Gaps = 1/135 (1%)
Strand=Plus/Plus
Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794
|||| || || || || || ||||| |||||||||||||||||||||||||| || ||||
Sbjct 169594 ATGCTGTTATCACAGTACCTGCATACTTTAATGATTCTCAACGTCAAGCAACCAAGGATG 169653
Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854
| |||| || | || || ||||| || | || || ||||| || || || || ||
Sbjct 169654 CTGGAACTATCTCTGGGCTAAATGTGTTGAGAATAATCAATGAGCCCACTGCTGCAGCTA 169713
Query 474855 TTGCTTATGGTCTTG 474869
|||||||||| ||||
Sbjct 169714 TTGCTTATGG-CTTG 169727
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3267909219801512
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |