Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_020488.1 Length=38682 Score E Sequences producing significant alignments: (Bits) Value seq120 95.1 3e-15 >seq120 Length=812315 Score = 95.1 bits (104), Expect = 3e-15 Identities = 186/275 (68%), Gaps = 0/275 (0%) Strand=Plus/Minus Query 25828 CCACTTGCGCGTGCGCAACTTGCCTTCAATGTAAAGCTTTGAGCCTTTGCGTGTGTACTC 25887 ||||| ||| ||||| | ||||||| | ||| || ||||| || ||||| Sbjct 48419 CCACTCGCGGGTGCGGAGAGTGCCTTCGACGTAGCACTGGCTCCCTTTTCGCAGATACTC 48360 Query 25888 GCCGGCCACCTCTGCCAACTTCCCGTATAACACAACACGGTGCCACTCTGTTTTTTCTAC 25947 || || | || || | ||| ||| | ||||| || ||||||||||| || || Sbjct 48359 ACCCGCGATTTCGGCGATCTTGCCGAAGAACACTACGCGGTGCCACTCGGTACGCTCCTG 48300 Query 25948 CGGCTGCCCTGTCTGCTTGTCTTTGTACTGCTCACTGGTGGCAATGCTTAAATTTGCCAC 26007 | |||| || |||||||| ||||| | || |||||||| | | ||| || | || Sbjct 48299 CTGCTGGCCGGTCTGCTTATCTTTCCAGCTTTCGCTGGTGGCCAGGGTTATGTTCGTTAC 48240 Query 26008 GGCGGTACCGTTAGGCATATACCTAACTTCCGGGTCCTGGCCTAAGTTGCCGACAATGAT 26067 |||| | ||||| || | || | ||||||||||| ||| ||||||||| | || Sbjct 48239 GGCGTTGCCGTTCGGGGTGTAGCGGACTTCCGGGTCGCCGCCGGCGTTGCCGACGAGAAT 48180 Query 26068 TACCTTGTTAATTCCGCGTGCCATTGCGCTCCTCC 26102 || ||||| | || |||||||| | | | |||| Sbjct 48179 CACTTTGTTGACGCCTCGTGCCATGGTGTTGCTCC 48145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123651557437232