Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq67 233 2e-56 seq30 87.8 2e-12 seq508 84.2 3e-11 >seq67 Length=1635559 Score = 233 bits (258), Expect = 2e-56 Identities = 964/1491 (65%), Gaps = 42/1491 (3%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| ||||| |||| | | ||||||||| | ||||| || | | | Sbjct 31956 CCCCAGCACATGCTCATGAGGGTTTCTGTTGGCATCCACAGAACGGACATCGACGCAGCC 32015 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||| ||| || | |||| | | || ||||| ||||| | || || ||||| Sbjct 32016 ATTGAGACCTACAACCTGCTGTCGGAGAAGTG-GTTCACCCACGCCTCGCCTACTCTCTT 32074 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 |||||| ||||| || || ||| ||||||| |||||||| |||||| ||||| || Sbjct 32075 CAATGCCGGTACCAACAGGCCTCAGCTGTCCAGCTGCTTCCTGCTCGCCATGAAGGACGA 32134 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 | ||| | || ||||| | ||||| | | ||||||| | |||||||||| |||||| Sbjct 32135 CAGCATCGAAGGCATCTACGACACTCTGAAGCAGTGTGCCCTCATCTCAAAGTCGGCTGG 32194 Query 75451 GGGTATTGGGATGCACATCCATGATG--TGAGAGCCA-ATAAATCTCGTATTCGGGGGAC 75507 || || || || || | || | ||| | | | | || ||| || || Sbjct 32195 AGGAATCGGTGTGGCTGTC--AGCTGCATCAGATCAACAGGGAGCT-ACATTGCCGGCAC 32251 Query 75508 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 75567 ||| || | ||| | || | | || ||||| | || | ||| ||| ||||| || Sbjct 32252 AAACGGCAACTCAAACGGGTTAGTCCCCATGCTGAGAGTTTACAACAACACGGCGCGTTA 32311 Query 75568 TGTAAATCAAGCGGGGCGTCGCAAG----GGGTCCATCGCGGTCTACTTGGAACCATGGC 75623 ||| | | || | ||| | ||| || || |||| | ||| |||| || |||| Sbjct 32312 TGTCGA-CCAGGGCGGCAACAAAAGACCCGGAGCCTTCGCCATGTACCTGGAGCCGTGGC 32370 Query 75624 ATGCCGATATCATGGAGTTCCTTGAG-TTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 | |||| | | || ||||| ||| | | || ||| ||| | || ||| || Sbjct 32371 ACTTCGATGTGTTTGACTTCCTGGAGCTGAAGA-AGAACACAGGAAAGGAGGAGCAGAGG 32429 Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742 ||||| || || | |||||||||| || ||| | ||||||||| | || ||| Sbjct 32430 GCCAGAGACCTTTTCTACGCCCTGTGGATCCCTGACTTGTTCATGAAGAGAGT---GGAA 32486 Query 75743 GGTGGTCAA---TGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGT- 75798 | ||| |||||||| | ||||| | || || || || ||| | | | Sbjct 32487 AGCAACCAAGACTGGTCTCTGATGTGTCCCAATGAGTGTCCCGGGCTGGACGA-GTGTTG 32545 Query 75799 GGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGAC 75858 ||||||||||||||| |||||||| ||||| ||||||| || | ||| ||| Sbjct 32546 GGGTGAGGAGTTTGAGAAGCTCTACACTTCATATGAGAAGGAGGGGAGGGTCAA-GCGTG 32604 Query 75859 TGTACCAGCCGCCG-ATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACAC 75917 || || | | | | || ||| | || || | | || ||||| || || || || | Sbjct 32605 TGGTGAAGGCTCAGCAGGTGTGGCACGCCATCATTGAGTCCCAGACAGAAACCGGTACGC 32664 Query 75918 CATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAA 75977 | || ||||| ||||| || || || ||| ||||| ||||| ||||| |||| |||| Sbjct 32665 CGTACATGCTGTACAAAGACGCCTGCAACCGAAAGAGCAACCAGCAGAATCTGGGCACAA 32724 Query 75978 TCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTG 76037 |||| ||| || || ||||| ||||| | || ||||| | |||||| || | Sbjct 32725 TCAAAAGCAGCAACCTCTGCACAGAAATCGTTGAATACACCAGCGACGATGAGGTAGCGG 32784 Query 76038 TTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTG 76097 | || ||| |||| || || || || | ||| |||| ||| || ||||||| Sbjct 32785 TCTGTAATCTGGCCTCCATTGCGCTCAACATGTACGTCACCCCTGAG---CGGACTTTTG 32841 Query 76098 ATTATGAAAAACT-TCA--TGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCA 76154 | | | ||||||| || || | || | ||||| || ||| | ||| ||| Sbjct 32842 ACTTTAAAAAACTAGCATCTGTGACCAAAGTCATTGT---CAGAAACTTGAACAAGATCA 32898 Query 76155 TTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTA 76214 | || | || || ||||| || ||| ||||| || | ||| ||||| || | Sbjct 32899 TCGAGATTAACTTCTATCCAGTGCCCGAAGCGGAGAAGTCCAACAAGCGTCACAGGCCAA 32958 Query 76215 TTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATT 76274 | || | || ||||||||| | ||||||| || || || || ||| | ||||| Sbjct 32959 TAGGAATCGGCGTTCAAGGTTTGGCGGATGCCTTCATCCTGATGCGTTACCCGTTTGAAA 33018 Query 76275 CAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGG 76334 || || || | |||| | |||||||| ||||| || |||| |||||| Sbjct 33019 GCCCCGAGGCGCAGCTGCTGAACATCCAAATCTTTGAGACCATCTACTACGCCGCCCTGG 33078 Query 76335 AGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCG 76394 ||||||| || || |||| | | | || |||| ||||| | || || ||||| Sbjct 33079 AGGCGAGCTGCGAGCTGGCCGCTGAGCTCGGCCCCTACGAGACGTACGAAGGCTCTCC-- 33136 Query 76395 CGTC-CCAAGGGG-TGCTTCAGTTTGATATGTGGGAAGGTGAAACCAA--GCTCAACTAC 76450 ||| ||||||| | || |||| || ||||||| || || || | | || | Sbjct 33137 GGTCAGCAAGGGGATCCTCCAGTACGACATGTGGG-AGAAGACGCCCACCGATC-TGTTG 33194 Query 76451 GACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATG 76510 |||||| | | || |||||| ||| | | || | | ||||| || || || Sbjct 33195 GACTGGAAGCTGCTGAAGGAAAAGATCGCCAAACACGGCGTGAGGAACAGCCTACTGCTG 33254 Query 76511 GCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCA 76570 || || ||||| || |||||||| ||||| ||| |||| || || || | | ||| | Sbjct 33255 GCCCCGATGCCCACGGCCTCCACAGCACAGATCCTGGGCAACAACGAGTCTATCGAAGCC 33314 Query 76571 TACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAG 76630 ||||| | ||||||||| | || |||| | || |||||| || || || Sbjct 33315 TACACCAGCAACATCTACACCCGCAGGGTCCTCTCTGGAGAGTTTCAGATCGTGAATCCT 33374 Query 76631 CACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAG 76681 || || |||| ||||| | | ||| || || ||| | |||| |||||| Sbjct 33375 CATCTGCTCAAAGACCTGACGGAGAGGGGGCTGTGGAACGAGGAGATGAAG 33425 >seq30 Length=3550406 Score = 87.8 bits (96), Expect = 2e-12 Identities = 135/190 (71%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 75829 GTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTT-TGGAAGGCTA 75887 |||||| ||||||| || ||||| ||| || || | | | | | ||| | || | Sbjct 773165 GTATGAGAAGGAGGGCAGGGCCAA-GCGTGTGGTGAAGGCTCAGCAGCTGTGGTACGCCA 773223 Query 75888 TTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACA 75947 | || | || |||||||| || ||||| || || ||||||||||||||||| || || Sbjct 773224 TCATCGAGTCTCAGACGGAAACGGGAACCCCGTACATGCTTTACAAGGATGCCTGCAATG 773283 Query 75948 AGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTT 76007 |||||| ||||| |||| |||| || ||||| | || || ||||| || || Sbjct 773284 GGAAGAGCAACCAGCAGAACCTGGGCACCATCAAATCCAGCAACCTGTGCACAGAGATCG 773343 Query 76008 TAGAGTACAC 76017 |||||||||| Sbjct 773344 TAGAGTACAC 773353 >seq508 Length=211378 Score = 84.2 bits (92), Expect = 3e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 65101 GTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGT 65160 |||||||||||||||||||| || |||||| || || |||||| | |||||| | || Sbjct 169527 GTGGAGGGTATCTTCTTCTCAGGCTCATTCGCTGCCATCTATTGGCTCAAGAAGAGAGGG 169586 Query 65161 CTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGG 65209 || ||||| || || |||||| ||||| || ||| | | ||||||| Sbjct 169587 CTAATGCCTGGTCTTACCTTCTCCAATGAGCTGATTAGCAGGGATGAGG 169635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596522664886720