Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17]
6,294 sequences; 619,300,777 total letters
Query= NC_021774.1
Length=29742
Score E
Sequences producing significant alignments: (Bits) Value
seq2742 113 9e-21
>seq2742
Length=6849
Score = 113 bits (124), Expect = 9e-21
Identities = 643/1006 (64%), Gaps = 47/1006 (5%)
Strand=Plus/Minus
Query 1492 CACCAACTGGAATACGCCGAGACCGAGGCCGGTCGCGTCAATGCCGATGTATTCGACGTT 1551
||||| | ||| || ||| ||||| |||||| ||| |||||||||| | ||||||
Sbjct 2118 CACCAGGTCGAACACCCCGTAACCGACGCCGGTAATGTCGATGCCGATGTGCTGGACGTT 2059
Query 1552 GTATTTCTCAGTGAGCCTGCGGATGCCTTCTGCCTGC-GCGGCAAAGTCCATGCCTTTCC 1610
| | ||| ||| | ||| | |||||| ||| || | | | || ||
Sbjct 2058 GAAGCGCTCGCACAGCTTCTCGATCTGCTTTGCCTGATGCGTGAACGACG-TCCCCCGCC 2000
Query 1611 ACTGGTGACGCTCCAGCATGCGAAACTTGCCACCCGAAACCACCGGCGGCGCGAGTACGA 1670
| ||| |||||| || || |||||||| |||| ||| ||||| || | || |
Sbjct 1999 AGCTGTGCTTCTCCAGGATTCGGAACTTGCCGCCCGGCTCCAGGGGCGGGGCAACGACAA 1940
Query 1671 CACATCCGGCACTGTCGCCAGTGTGGGAC--GGGTCGTAGCCAATCCAGACCGGGCGCGA 1728
| || || ||||| | || ||| ||||| || || | ||||||||||||
Sbjct 1939 CGCACGTCGCGTCGTCGC--GGGTTCGACTGGGGTCATACCCGAGCCAGACCGGGCGGTT 1882
Query 1729 GCCGAACGGGTGGTCGGCGAACGGGGCGAAGTCCTCCCATGTTTCCATCACGTCGACCAT 1788
| ||||||| | | | |||| || |||| |||| ||| || || |
Sbjct 1881 GTCGAACGGCCGCGGGCTGTCCGGGTCGTAGTCAGTCCATAGGCCCAAGTCG--GAATA- 1825
Query 1789 GCAGCGCTGCAGCTCCTCGAACGGGAATACCGA-TGCCTTATCGTCGACAAACTCGCACA 1847
|||||||| ||| || || | |||| | | || | | ||||| |||| |||||
Sbjct 1824 GCAGCGCTCCAGGTCGGTCAAGGCGAATGCAGCCTGGGTGCT-GTCGATGAACTTGCACA 1766
Query 1848 TAAACAGGTTCTTAAAGTCCTCATCACTGTTTTCGCGTCTG-AGCTGGTCGAGGTCGAAC 1906
| ||||| | | ||| ||| || || || | ||| || | || |||||||||
Sbjct 1765 TGAACAGCTGTTCGAAGCGCTCTTCGTCGTACTCCAG-CTGCAGGCGCTCCAGGTCGAAC 1707
Query 1907 AGGGTGCAGCCACCGGCAAGGGCGTCCTCAATAGTGACAATCTGCCGCCACTGTCCGTCA 1966
||| ||||||| ||||| | |||||| | ||| |||| | || |||||||| |||||
Sbjct 1706 AGGTTGCAGCCGCCGGCGATGGCGTCTTGAATCGTGATGACCTTGCGCCACTGCCCGTCC 1647
Query 1967 GCGCAAAGAAGCCCACCGGC---GAGC-GCGCTGTGACTGATGTCGATTTCGATGCGGTC 2022
| ||| | | | ||||| || | ||||| | ||| | | | || ||| |
Sbjct 1646 GGGCACAA---CGCGCCGGCATGGATCTGCGCTTCG-CTG--GGCCA---CGGCCCGGCC 1596
Query 2023 AGCAGCACTGGCGCGCCCCTTGTTG---AACAGCTCGCCAGACCAGAAGGGATAAGCGCC 2079
| | ||||| ||||| ||| |||||| | |||| | ||||| ||
Sbjct 1595 TTCT----TTCCGCGCTTGCTGTTGCGGAACTCCTCGCCGGTCCAGTACGGATATGCCTG 1540
Query 2080 GTGCGCCAGCGTGGAAGGTGTCGAAAAGTAAGTTGAGCGCAGATGCTTCTGCGAGGCCAT 2139
||||| | || | || || || ||||| || |||| | |||||||||||
Sbjct 1539 GTGCGTTACCGCGCTGGGCGTGGAGAAGTAGGTCAGGCGCCACTTTGCATGCGAGGCCAT 1480
Query 2140 GCCCGATG-CGACTTTGCGCAGCTTCTGAAAATTCGGGATCCAGAATATTTCATCGACAT 2198
| || || | || | |||||||||| ||||| ||||||||||| | ||| |||| |
Sbjct 1479 -CGCGCTGGCCACCGTCTGCAGCTTCTGGAAATTGGGGATCCAGAACACTTCGTCGATGT 1421
Query 2199 ACAGGTCGCCGTTATGGCTTTGTGCGGTGTTGGAATTGGTGCCGAGAAAAATCAGCTTTG 2258
| | || ||||| | ||| || || |||||| || || |||||| ||| | |
Sbjct 1420 AGACGTGGCCGTGGTAGCTCTGCGCCGTGTTGCTGTTCGTCGAGAGAAACCGCAGTTCCG 1361
Query 2259 C---------GCCGTTGTTGCCGATAACAATCGGGTCGCCGGTCAGGTCGACGTC-AACC 2308
| ||||| |||| | | || || | ||||| ||| |||| || ||||
Sbjct 1360 CCCACGGCTTGCCGTCTTTGCTCAAGATGATGGGATTGCCGGACAGCTCGATATCGAACC 1301
Query 2309 AGT-CGC-GCAAACTGGATGATGTATTCCCGGAACACGTAAGCCTGCGTTTTACTGGCCG 2366
| | ||| || ||| || |||||| |||||||| | | ||| | || || |
Sbjct 1300 ATTGCGCGGCGAACGCGACGATGTAGCTGCGGAACACTTCGGACTGGGCGCGGCTCGCGG 1241
Query 2367 ACAGAAAAATCTGGTTATGGCCGGTCTTGAGCGCGCGCAGCAGTGCCTCGCGGGAAAAGT 2426
|||| ||||||||||| | |||||| | ||| || | || ||| || ||||
Sbjct 1240 ACAGGAAAATCTGGTTGTCCCCGGTCAGCACTGCGTCCATGAACGCTTCGGCGGCGAAGT 1181
Query 2427 AGAACGTCGCGCCAATCTGGCGGGATTTGAGAATATCGCGAATACG 2472
|| | ||| || |||||||| || || || |||| ||| || ||
Sbjct 1180 AGTAGGTCAGCCCGATCTGGCGCGACTTCAGGATATGGCGGATCCG 1135
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 95045695634912
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |