Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17]
6,294 sequences; 619,300,777 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq67 163 3e-35
seq331 104 2e-17
>seq67
Length=1635559
Score = 163 bits (180), Expect = 3e-35
Identities = 938/1479 (63%), Gaps = 67/1479 (5%)
Strand=Plus/Minus
Query 138540 GTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGT 138599
||| |||||| ||||| | | || | || |||||||| ||||| ||||| || ||||
Sbjct 33332 GTAGATGTTGCTGGTGTAGGCTTCGATAGACTCGTTGTTGCCCAGGATCTGTGCTGTGGA 33273
Query 138600 CGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTC 138659
|| || ||||| |||| || || |||| | ||||| ||| |||
Sbjct 33272 GGCCGTGGGCATCGGGGCCAGCAGTAGGCTGTTCCTCACGCCGTGTTTGGCGATCTTTTC 33213
Query 138660 CTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAA 138719
||| ||| | ||||||| ||| |||| | || | || | |||||| |||||||| |
Sbjct 33212 CTTCAGCAGCTTCCAGTCCAACAGATCGGTGGGCGTCTTCTCCCACATGTCGTACTGGAG 33153
Query 138720 CATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAA 138779
|| ||| || | ||| ||||||||||| ||||| || | ||| ||||
Sbjct 33152 GATCCCCTTGCTGACCGGAGAGCCTTCGTACGTCTCGTAGGGGCCGAGCTCAGCGGCCAG 33093
Query 138780 CTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAA 138839
|||| ||||||||| || || | ||||| || || || || || || ||||
Sbjct 33092 CTCGCAGCTCGCCTCCAGGGCGGCGTAGTAGATGGTCTCAAAGATTTGGATGTTCAGCAG 33033
Query 138840 TCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTG 138899
| ||||||| ||| || |||| || | || |||| || || |||| |||||
Sbjct 33032 CTGCGCCTCGGGGCTTTCAAACGGGTAACGCATCAGGATGAAGGCATCCGCCAAACCTTG 32973
Query 138900 CACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCGGCTTCG---ATAGG 138956
||||| | ||| | || | || ||| || ||| || | |||||| | ||
Sbjct 32972 AACGCCGATTCCTATTGGCCTGTGACGCTTGTTGGAC---TTCTCCGCTTCGGGCACTGG 32916
Query 138957 ATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGT--CGTATGC 139014
||| |||| | |||||||| ||||| || |||| || | || || || | ||||
Sbjct 32915 ATAGAAGTTAATCTCGATGATCTTGTTCAAGTTTCTGACAATGACTTTGGTCACAGATGC 32856
Query 139015 TTTAATCGTTCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTG 139074
|| | || ||| || | || ||| || | ||||| ||| |||||
Sbjct 32855 --TAGTTTTTTAAAGTCAAAAGT----CCG--CTCAGGGGTGACGT--ACA----TGTTG 32810
Query 139075 ACACAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATT 139134
| ||| ||||| | || || ||||| || || ||| | | ||||||| || |||
Sbjct 32809 AGCGCAATGGAGGCCAGATTACAGACCGCTACCTCATCGTCGCTGGTGTATTCAACGATT 32750
Query 139135 TCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTA 139194
|| | || | || || | ||||| || || | ||| || || ||||| ||||||||
Sbjct 32749 TCTGTGCAGAGGTTGCTGCTTTTGATTGTGCCCAGATTCTGCTGGTTGCTCTTTCGGTTG 32690
Query 139195 CAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAAT 139254
|| || |||||||| ||||| ||||| || || ||||| || | ||| || |||
Sbjct 32689 CAGGCGTCTTTGTACAGCATGTACGGCGTACCGGTTTCTGTCTGGGACTCAATGATGGCG 32630
Query 139255 TTGAACAAGTCCCTAGCTTGTATTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTC- 139313
| ||| ||| ||| || || ||| | | | | | | | | | ||| ||
Sbjct 32629 TGCCACA----CCT-GCTGAGCCTTCAC-CAC---ACGCTTGACCCTCCCCTCCTTCTCA 32579
Query 139314 --------GTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTG 139365
|||||| | || || ||||| | || || || ||||||
Sbjct 32578 TATGAAGTGTAGAGCTTCTCAAACTCCTCACCCCAACACTCGTCCAGCCCGGGACACTCA 32519
Query 139366 TCAGGACACATGAGCGACCATACGCCGTTCGCCTT-GACGCGCCTCATGAACAGATCCGG 139424
| |||||||| || ||||| | ||| || || || | | ||||||||| || ||
Sbjct 32518 TTGGGACACATCAGAGACCAGTCTTGGTT-GCTTTCCACTCTCTTCATGAACAAGTCAGG 32460
Query 139425 AATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTT 139484
||||||| ||| | | | || | ||| ||| || ||| || |||| ||
Sbjct 32459 GATCCACAGGGCGTAGAAAAGGTCTCTGGCCCTCTGCTCCTCCTTTCCTGTGTTCTTCTT 32400
Query 139485 CATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCC 139544
|| | ||||| ||||| || || |||||| || ||||| || ||||| | || ||
Sbjct 32399 CAGCTCCAGGAAGTCAAACACATCGAAGTGCCACGGCTCCAGGTACATGGCGAAGGCTCC 32340
Query 139545 ---TTTCCGTTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACAT 139601
| | ||||| || || ||||| | || | | || ||| | || | || |||
Sbjct 32339 GGGTCTTTTGTTGCCGCCCTGGTCGACATAACGCGCCGTGTTGTTGTAAACTCTCAGCAT 32280
Query 139602 CGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGG--ATG----GGACTGTTGCGAGC 139655
|| | | ||| | | | ||||| |||| ||| ||| ||||| |
Sbjct 32279 GGGGACTAACCCGTTTGAGTTGCCGTTTGTGC--CGGCAATGTAGCTCCCTGTT----GA 32226
Query 139656 TCGGACGTCATGT-ACATTGATGCCGATTCCGCC-GCCAAATTTGGATATTAAAACGCAA 139713
|| || | || | ||| | |||||||| || ||| | ||| || || | | ||
Sbjct 32225 TCTGATG-CAGCTGACAGCCACACCGATTCCTCCAGCCGACTTT-GAGATGAGGGCACAC 32168
Query 139714 TCGCGT-AATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCA 139772
| || | | || ||||| || ||| ||||||||||||| ||| | || ||| |||||
Sbjct 32167 T-GCTTCAGAGTGTCGTAGATGCCTTCGATGCTGTCGTCCTTCATGGCGAGCAGGAAGCA 32109
Query 139773 TGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAA 139832
|| || || || || || ||||| || |||||||| ||||| |||||
Sbjct 32108 GCTGGACAGCTGAGGCCTGTTGGTACCGGCATTGAAGAGAGTAGGCGAGGCGTGGGTGAA 32049
Query 139833 CATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGAT 139892
| | | ||||| || | ||| || || ||||| | || ||| ||| ||||||
Sbjct 32048 CCACTTCTCCGACAGCAGGTTGTAGGTCTCAATGGCTGCGTCGATGTCCGTTCTGTGGAT 31989
Query 139893 ACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttt 139952
|| ||||| || | ||| ||||| || ||| ||||||||||| ||| | ||| ||
Sbjct 31988 GCCAACAGAAACCCTCATGAGCATGTGCTGGGGTCGTTCGGCCACTTTGCCGTTGATCTT 31929
Query 139953 tttCAGATA--ACCGTTCTCTAGGGTCTTGTAGCCAAAG 139989
||| || |||| ||| || |||||| ||||||||
Sbjct 31928 CAGCAGGTAGGACCG--CTCCAGAGTCTTGAAGCCAAAG 31892
>seq331
Length=323222
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || ||||| || || || || || || || || ||| |
Sbjct 7700 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTTGAGCCCAGC 7641
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| || || ||||| || || ||||| ||
Sbjct 7640 GACACCATTGAGAACGTCAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCCGACCAG 7581
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||||| || || |||||||| ||| | | | | || || ||||||
Sbjct 7580 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTATAAC 7521
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
|| || ||||| || || || ||| | || ||||
Sbjct 7520 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCG 7486
Score = 100 bits (110), Expect = 3e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || ||||| || || || || || || || || |||
Sbjct 7928 ATGCAGATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 7869
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| || || ||||| || || ||||| ||
Sbjct 7868 GACACCATTGAGAACGTCAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCCGACCAG 7809
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | ||||||||||||| || |||||||| ||| | | | | || || || |||
Sbjct 7808 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAAC 7749
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
|| || ||||| || || || ||| | || ||||
Sbjct 7748 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCG 7714
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449862204306320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |