Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_023575.1 Length=45550 Score E Sequences producing significant alignments: (Bits) Value seq120 217 4e-52 >seq120 Length=812315 Score = 217 bits (240), Expect = 4e-52 Identities = 235/307 (77%), Gaps = 7/307 (2%) Strand=Plus/Minus Query 30085 GTCGACGATGATCTCTGTTGTGTAGCGGTCCTGACCGTCCTGCGCCTGCCACTTTCGAGT 30144 |||||||| |||||| || |||||||| | | ||||| | || |||| || || Sbjct 48464 GTCGACGACGATCTCGGTGGTGTAGCGTTTCACTCCGTCTTTTTCC---CACTCGCGGGT 48408 Query 30145 TCTGAGTGAACCCTCGACGTA-CAGTTGCTGACCCTTCTTTACG-TGCTGCCCGACGATC 30202 | ||| | || |||||||| || | ||| ||||| | | | || || |||| Sbjct 48407 GCGGAGAGTGCCTTCGACGTAGCACTGGCT--CCCTTTTCGCAGATACTCACCCGCGATT 48350 Query 30203 TCCGCCAACTTCCCGAAGAACACCACGCGGTGCCATTCGGTGCGCTCCTGTTGCTGGCCG 30262 || || | ||| ||||||||||| ||||||||||| ||||| |||||||| ||||||||| Sbjct 48349 TCGGCGATCTTGCCGAAGAACACTACGCGGTGCCACTCGGTACGCTCCTGCTGCTGGCCG 48290 Query 30263 GTCTGCTTGTCCTTCCAGCTCTCGCTGGTGGCGAGGGTGATGTTGGTCACCGCATTGCCG 30322 |||||||| || |||||||| ||||||||||| ||||| ||||| || || || |||||| Sbjct 48289 GTCTGCTTATCTTTCCAGCTTTCGCTGGTGGCCAGGGTTATGTTCGTTACGGCGTTGCCG 48230 Query 30323 TTGGGCATATAGCGAGTTTCCGGGTCACCACCGACGTTGCCAACCAGAATGACTTTGTTA 30382 || || | ||||| ||||||||| || ||| ||||||| || ||||| |||||||| Sbjct 48229 TTCGGGGTGTAGCGGACTTCCGGGTCGCCGCCGGCGTTGCCGACGAGAATCACTTTGTTG 48170 Query 30383 ACGCCTC 30389 ||||||| Sbjct 48169 ACGCCTC 48163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145627514803936