Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miichthys_20miiuy_20[genbank_20GCA_5F001593715.1_202016-03-17] 6,294 sequences; 619,300,777 total letters Query= NC_023588.1 Length=33525 Score E Sequences producing significant alignments: (Bits) Value seq2742 105 1e-18 >seq2742 Length=6849 Score = 105 bits (116), Expect = 1e-18 Identities = 256/381 (67%), Gaps = 20/381 (5%) Strand=Plus/Minus Query 3747 GGCGTGCTGAAGTAGGTCTTGCGCCACTTCTTGTGCATCGCCATGCCGCTGGCGACCTTG 3806 |||||| |||||||||| ||||||||| ||| ||||| ||||||| ||| | Sbjct 1523 GGCGTGGAGAAGTAGGTCAGGCGCCACTTTGCATGCGAGGCCATCGCGCTGGCCACCGTC 1464 Query 3807 TTCAGCTGGTTGAAACCGTAGGTCCAGAAGAACTCGTCAAAGTAGAAATTGCCGTGGTAG 3866 | ||||| | |||| | | ||||||| | ||||| | ||||| | |||||||||| Sbjct 1463 TGCAGCTTCTGGAAATTGGGGATCCAGAACACTTCGTCGATGTAGACGTGGCCGTGGTAG 1404 Query 3867 CCCTGTGCGGTGCGGGCGTTGGTGCCCAGGAAGAACAGCTCGGCGC------------CA 3914 | ||| || ||| | ||| || || || ||| || || | | Sbjct 1403 CTCTGCGCCGTGTTGCTGTTCGTCGAGAGAAACCGCAGTTCCGCCCACGGCTTGCCGTCT 1344 Query 3915 TTGGCCAGGGTGATCGGGTCGCCGGTCAGGTCACGGTCCAGCACCTCACGCA-CGAA-GC 3972 ||| || | |||| || | ||||| ||| || || | | | | ||| |||| || Sbjct 1343 TTGCTCAAGATGATGGGATTGCCGGACAGCTCGATATCGAAC-CATTGCGCGGCGAACGC 1285 Query 3973 CCCGCATATAGCCGAGGAAGATGTGCG-CTTGGCTCTTGGAT-GCGCTCAGGAAAATCTG 4030 || || |||| | |||| | | | || ||| | || | ||| |||||||||||| Sbjct 1284 GACG-ATGTAGCTGCGGAACACTTCGGACTGGGCGC--GGCTCGCGGACAGGAAAATCTG 1228 Query 4031 GTTGCGGCCGGTGGTCAGCGCGTCGATCAGCGCCTCGCGGGCGAAGTAGTAGGTGGCACC 4090 |||| ||||| || ||||| || | ||| ||| ||||||||||||||| || Sbjct 1227 GTTGTCCCCGGTCAGCACTGCGTCCATGAACGCTTCGGCGGCGAAGTAGTAGGTCAGCCC 1168 Query 4091 GATCTGGCGCGACTTCAGGAT 4111 ||||||||||||||||||||| Sbjct 1167 GATCTGGCGCGACTTCAGGAT 1147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107150390847236